Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040505.1-P | Field mustard | nucleus | 98.88 | 99.44 |
| CDX86714 | Canola | nucleus | 13.01 | 82.35 |
| CDX69548 | Canola | nucleus | 49.44 | 61.57 |
| CDX70593 | Canola | nucleus | 59.48 | 60.84 |
| CDX78611 | Canola | nucleus | 59.48 | 60.72 |
| CDX69549 | Canola | nucleus | 61.71 | 60.25 |
| CDX85052 | Canola | nucleus | 61.34 | 60.0 |
| CDY63770 | Canola | nucleus | 56.51 | 59.14 |
| CDX85563 | Canola | nucleus | 30.48 | 52.9 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 37.73 | 40.44 |
| Zm00001d045375_P001 | Maize | nucleus | 18.59 | 40.0 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 23.98 | 39.57 |
| CDY26717 | Canola | nucleus | 21.0 | 39.37 |
| Solyc02g067430.2.1 | Tomato | nucleus | 32.16 | 39.32 |
| PGSC0003DMT400017859 | Potato | nucleus | 31.97 | 38.83 |
| KRG93506 | Soybean | nucleus | 35.32 | 38.78 |
| CDX97845 | Canola | nucleus | 17.1 | 38.17 |
| KRH01137 | Soybean | nucleus | 37.55 | 37.34 |
| KRH40121 | Soybean | nucleus | 36.99 | 36.78 |
| CDX81493 | Canola | nucleus | 19.52 | 33.87 |
| CDX81900 | Canola | nucleus | 32.34 | 33.53 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 30.48 | 33.47 |
| CDY21693 | Canola | nucleus | 31.97 | 33.14 |
| Os01t0185900-01 | Rice | nucleus | 31.23 | 33.14 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 30.3 | 33.13 |
| CDY11652 | Canola | nucleus | 23.42 | 32.9 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 36.8 | 32.73 |
| CDX83804 | Canola | nucleus | 31.04 | 32.43 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 36.43 | 32.4 |
| CDX96692 | Canola | nucleus | 31.04 | 32.3 |
| CDY01891 | Canola | nucleus | 19.52 | 32.01 |
| CDY68857 | Canola | nucleus | 21.93 | 31.89 |
| CDX96044 | Canola | nucleus | 19.33 | 31.71 |
| CDY56082 | Canola | nucleus | 22.3 | 31.33 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 30.48 | 31.18 |
| Os06t0146250-00 | Rice | nucleus | 34.76 | 30.96 |
| OQU75809 | Sorghum | nucleus | 35.87 | 30.88 |
| Zm00001d008794_P001 | Maize | nucleus | 30.48 | 30.37 |
| EES02331 | Sorghum | nucleus | 30.11 | 29.56 |
| Zm00001d039532_P001 | Maize | nucleus | 29.93 | 29.43 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 32.53 | 28.93 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 31.6 | 28.76 |
| CDX72327 | Canola | nucleus | 15.06 | 28.42 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 32.16 | 28.41 |
| CDX75196 | Canola | nucleus | 14.5 | 27.56 |
| CDY22006 | Canola | nucleus | 24.16 | 26.53 |
| CDY07121 | Canola | nucleus | 24.16 | 26.26 |
| CDY67287 | Canola | nucleus | 14.13 | 26.21 |
| CDY22299 | Canola | nucleus | 14.13 | 26.21 |
| CDX82900 | Canola | nucleus | 25.09 | 25.91 |
| CDY19535 | Canola | nucleus | 26.58 | 25.91 |
| CDY12937 | Canola | nucleus | 26.58 | 25.91 |
| CDY39879 | Canola | nucleus | 14.68 | 25.73 |
| CDX94553 | Canola | nucleus | 23.42 | 25.66 |
| CDY16669 | Canola | nucleus | 23.23 | 25.41 |
| CDX88573 | Canola | nucleus | 14.13 | 25.25 |
| CDX68787 | Canola | nucleus | 14.87 | 25.08 |
| CDX90863 | Canola | nucleus | 23.23 | 24.65 |
| CDY21301 | Canola | nucleus | 23.23 | 24.65 |
| CDX67971 | Canola | nucleus | 13.57 | 24.58 |
| CDX79347 | Canola | nucleus | 13.57 | 24.5 |
| CDY19255 | Canola | nucleus | 10.78 | 24.37 |
| CDX87347 | Canola | nucleus | 13.57 | 24.33 |
| CDY24892 | Canola | nucleus | 23.61 | 24.24 |
| CDY08634 | Canola | nucleus | 22.12 | 23.66 |
| CDY70096 | Canola | nucleus | 15.06 | 23.48 |
| CDY72612 | Canola | nucleus | 8.55 | 19.09 |
| CDX86713 | Canola | nucleus | 3.53 | 16.1 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078GUB2 | UniProt:A0A078GUB2 | EnsemblPlants:CDY28692 | ProteinID:CDY28692 |
| ProteinID:CDY28692.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00041323001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDD947 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaCnng05780DBnaCnng05780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GUB2]
Coordinates
chrLK032225:+:256669..258896
Molecular Weight (calculated)
58191.5 Da
IEP (calculated)
8.524
GRAVY (calculated)
-0.525
Length
538 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLKKLPTS DSIVKDEVAG SDGGIQESRK VSHELESANV EMREMKEENE KLKVMLEHIE SDYKSLRLIY LNKVQQKSSA KPVPDNKNDH LNAEFVSSSD
101: QEREFVSLSL GKRSSNSPSN SIANKEEKTK LICLGAKEEE ELTNAGLTLG PAVGLAKENR AISSLEYSSS EEAPAMNKVT GKRSSPSGGA DDNSQQNLAK
201: RARVCVRARC DTLTMNDGCQ WRKYGQKVAK GNPCPRAYYR CTVAPGCPVR RQVQRCVDDM SILITTYEGT HNHPLPLTAT AMASTTAAAA SMLLSGSSTS
301: GLDTEMIKNG MNFKLYDNNS RLINKPTVLS PLHPTVTLDL TIPMPKPSSS PYSLNFNTFS SLQRFPSTSL NFSASSSSSD STSTINIPTI WGSGYASCSP
401: VTDNKVHTGR PSFLNIGKNL PQNPSLTETL TKALTSDPSF HSVIAQAIST MVGSGNGDQQ SARTLNSLSI TKQQAAADSN NKNKGCEGYF SSLLMSNMAN
501: PGMLSTLNLP SSELPFTLFT TSSSSSKPSF SNEEKKRL
101: QEREFVSLSL GKRSSNSPSN SIANKEEKTK LICLGAKEEE ELTNAGLTLG PAVGLAKENR AISSLEYSSS EEAPAMNKVT GKRSSPSGGA DDNSQQNLAK
201: RARVCVRARC DTLTMNDGCQ WRKYGQKVAK GNPCPRAYYR CTVAPGCPVR RQVQRCVDDM SILITTYEGT HNHPLPLTAT AMASTTAAAA SMLLSGSSTS
301: GLDTEMIKNG MNFKLYDNNS RLINKPTVLS PLHPTVTLDL TIPMPKPSSS PYSLNFNTFS SLQRFPSTSL NFSASSSSSD STSTINIPTI WGSGYASCSP
401: VTDNKVHTGR PSFLNIGKNL PQNPSLTETL TKALTSDPSF HSVIAQAIST MVGSGNGDQQ SARTLNSLSI TKQQAAADSN NKNKGCEGYF SSLLMSNMAN
501: PGMLSTLNLP SSELPFTLFT TSSSSSKPSF SNEEKKRL
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.