Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027057.1-P | Field mustard | nucleus | 99.64 | 99.64 |
| CDY19535 | Canola | nucleus | 98.19 | 98.19 |
| AT1G62300.1 | Thale cress | nucleus | 86.41 | 86.26 |
| CDY08634 | Canola | nucleus | 73.01 | 80.12 |
| CDY24892 | Canola | nucleus | 72.28 | 76.14 |
| CDX86714 | Canola | nucleus | 11.23 | 72.94 |
| CDX97845 | Canola | nucleus | 27.36 | 62.66 |
| PGSC0003DMT400056725 | Potato | nucleus | 49.09 | 54.64 |
| CDX82900 | Canola | nucleus | 51.45 | 54.51 |
| Solyc02g032950.2.1 | Tomato | nucleus | 48.91 | 54.22 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 37.14 | 53.66 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 33.88 | 53.43 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 51.27 | 52.9 |
| PGSC0003DMT400042400 | Potato | nucleus | 51.99 | 51.9 |
| Solyc02g080890.2.1 | Tomato | nucleus | 51.63 | 51.82 |
| KRH36485 | Soybean | nucleus | 50.72 | 51.76 |
| KRH02033 | Soybean | nucleus | 45.47 | 51.33 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 45.11 | 51.23 |
| KRH11472 | Soybean | nucleus | 51.63 | 51.17 |
| CDY21301 | Canola | nucleus | 46.92 | 51.08 |
| CDX90863 | Canola | nucleus | 46.56 | 50.69 |
| KRH51128 | Soybean | nucleus, plastid | 47.28 | 50.48 |
| CDX94553 | Canola | nucleus | 43.84 | 49.29 |
| CDY16669 | Canola | nucleus | 43.66 | 48.98 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 46.56 | 48.31 |
| GSMUA_Achr10P... | Banana | nucleus | 43.3 | 48.19 |
| GSMUA_Achr10P... | Banana | nucleus | 43.12 | 46.67 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 43.48 | 45.8 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 39.49 | 45.8 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 37.32 | 42.21 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 38.77 | 37.22 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 38.95 | 37.07 |
| Zm00001d039245_P001 | Maize | nucleus | 36.05 | 36.78 |
| EES02155 | Sorghum | nucleus | 36.59 | 35.44 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 38.77 | 34.02 |
| TraesCS3D01G173300.2 | Wheat | plastid | 38.77 | 33.65 |
| CDX81493 | Canola | nucleus | 18.84 | 33.55 |
| CDY22006 | Canola | nucleus | 29.71 | 33.47 |
| CDX75196 | Canola | nucleus | 17.03 | 33.22 |
| CDY07121 | Canola | nucleus | 29.71 | 33.13 |
| CDY68857 | Canola | nucleus | 22.1 | 32.97 |
| CDX72327 | Canola | nucleus | 16.67 | 32.28 |
| CDY56082 | Canola | nucleus | 22.28 | 32.11 |
| CDY67287 | Canola | nucleus | 16.67 | 31.72 |
| CDY22299 | Canola | nucleus | 16.67 | 31.72 |
| CDY11652 | Canola | nucleus | 21.92 | 31.59 |
| CDX96044 | Canola | nucleus | 18.48 | 31.1 |
| CDY39879 | Canola | nucleus | 17.21 | 30.94 |
| CDY01891 | Canola | nucleus | 18.12 | 30.49 |
| CDY26717 | Canola | nucleus | 15.76 | 30.31 |
| CDX88573 | Canola | nucleus | 16.49 | 30.23 |
| CDX68787 | Canola | nucleus | 17.39 | 30.09 |
| CDX87347 | Canola | nucleus | 16.12 | 29.67 |
| CDX79347 | Canola | nucleus | 15.94 | 29.53 |
| CDX67971 | Canola | nucleus | 15.58 | 28.96 |
| CDY70096 | Canola | nucleus | 17.39 | 27.83 |
| CDX96692 | Canola | nucleus | 25.36 | 27.08 |
| CDX83804 | Canola | nucleus | 25.18 | 26.99 |
| CDX69548 | Canola | nucleus | 21.01 | 26.85 |
| CDX81900 | Canola | nucleus | 25.0 | 26.59 |
| CDY28692 | Canola | nucleus | 25.91 | 26.58 |
| CDY21693 | Canola | nucleus | 24.82 | 26.4 |
| CDY63770 | Canola | nucleus | 24.46 | 26.26 |
| CDX70593 | Canola | nucleus | 24.64 | 25.86 |
| CDX78611 | Canola | nucleus | 24.64 | 25.81 |
| CDX85052 | Canola | nucleus | 24.28 | 24.36 |
| CDX69549 | Canola | nucleus | 24.09 | 24.14 |
| CDX85563 | Canola | nucleus | 13.04 | 23.23 |
| CDY19255 | Canola | nucleus | 9.78 | 22.69 |
| Os01t0246700-01 | Rice | nucleus | 16.12 | 21.55 |
| CDX86713 | Canola | nucleus | 3.8 | 17.8 |
| CDY72612 | Canola | nucleus | 6.7 | 15.35 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078FIZ3 | UniProt:A0A078FIZ3 | EnsemblPlants:CDY12937 | ProteinID:CDY12937 |
| ProteinID:CDY12937.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00070609001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEDD11 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA09g13370DBnaA09g13370D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIZ3]
Coordinates
chrLK032028:-:536974..539380
Molecular Weight (calculated)
60600.6 Da
IEP (calculated)
6.078
GRAVY (calculated)
-0.778
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRGWSGLTL DSSSLDLINP NRFKNNNHRR FLNPLTMSRM GDEDDQKTNM SIDGSEFRFP VSLSGIRDRE DDDSSSGVGR ENDREVPGEV DFFSDKKSRV
101: CQDEVDDAGL RVKKEEQDDR TDVNTGLNLR TTVNARSDQS VIDNGESSEM EDKRANNELV KLQDELKKMT MENEKLRELL TQVSNNYTSL HMHLVSLMQQ
201: QQQQQNKALE AAGKHEETIV PRQFIDLGPS RASDEAEDLS NSSSEDRTRS GGCSAVERRN NEVRDGKRLG REESPETESN KVQKVNNSSP PTFEQSTEAT
301: MRKARVSVRA RSEATMISDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AVAMASTTMA AANMLLSGSM
401: SSHDGMMNPT NLLARAVLPC STSMATISAS APFPTVTLDL THAPPLPNGS SPSTAAATNN HNSLMLRPQQ QMTNLPPNML PHVIGQALYN QSKFSGLQFS
501: SGSPSAAQSH AVADTISALT ADPNFTAALA SVISSMINGS NHHDGEGNNK NQ
101: CQDEVDDAGL RVKKEEQDDR TDVNTGLNLR TTVNARSDQS VIDNGESSEM EDKRANNELV KLQDELKKMT MENEKLRELL TQVSNNYTSL HMHLVSLMQQ
201: QQQQQNKALE AAGKHEETIV PRQFIDLGPS RASDEAEDLS NSSSEDRTRS GGCSAVERRN NEVRDGKRLG REESPETESN KVQKVNNSSP PTFEQSTEAT
301: MRKARVSVRA RSEATMISDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAE DRSILITTYE GNHNHPLPPA AVAMASTTMA AANMLLSGSM
401: SSHDGMMNPT NLLARAVLPC STSMATISAS APFPTVTLDL THAPPLPNGS SPSTAAATNN HNSLMLRPQQ QMTNLPPNML PHVIGQALYN QSKFSGLQFS
501: SGSPSAAQSH AVADTISALT ADPNFTAALA SVISSMINGS NHHDGEGNNK NQ
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.