Factsheet for GSMUA_Achr10P26050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P15200_001	Banana	nucleus	68.82	65.98
GSMUA_Achr6P05880_001	Banana	nucleus	56.86	60.92
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	37.65	54.86
GSMUA_Achr5P16750_001	Banana	nucleus	51.37	53.91
CDX97845	Canola	nucleus	24.31	51.45
GSMUA_Achr3P03090_001	Banana	nucleus	38.43	51.31
GSMUA_Achr6P13630_001	Banana	nucleus	52.55	51.15
GSMUA_Achr10P...	Banana	nucleus	49.22	50.6
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	9.61	50.52
VIT_10s0116g01200.t01	Wine grape	nucleus	51.18	48.78
Solyc02g080890.2.1	Tomato	nucleus	50.59	46.91
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	44.51	46.52
PGSC0003DMT400042400	Potato	nucleus	50.39	46.47
KRH36485	Soybean	nucleus	48.82	46.03
KRH11472	Soybean	nucleus	49.8	45.6
KRH51128	Soybean	nucleus, plastid	46.08	45.45
KRH02033	Soybean	nucleus	43.53	45.4
PGSC0003DMT400056725	Potato	nucleus	44.12	45.36
CDX94553	Canola	nucleus	43.53	45.21
Solyc02g032950.2.1	Tomato	nucleus	43.92	44.98
CDX82900	Canola	nucleus	45.88	44.91
VIT_12s0059g00880.t01	Wine grape	nucleus	51.96	44.69
CDX90863	Canola	nucleus	44.31	44.58
CDY21301	Canola	nucleus	44.12	44.38
AT4G04450.1	Thale cress	nucleus	45.88	44.32
CDY16669	Canola	nucleus	42.55	44.11
AT4G22070.1	Thale cress	nucleus	46.27	43.87
AT1G62300.1	Thale cress	nucleus	47.45	43.76
Bra000793.1-P	Field mustard	nucleus	44.51	43.74
Bra013584.1-P	Field mustard	nucleus	45.88	43.49
CDY19535	Canola	nucleus	46.86	43.3
CDY12937	Canola	nucleus	46.67	43.12
Bra029491.1-P	Field mustard	nucleus	41.57	43.09
PGSC0003DMT400038852	Potato	nucleus	47.06	43.09
Bra027057.1-P	Field mustard	nucleus	46.47	42.93
GSMUA_Achr11P...	Banana	nucleus	34.12	41.53
CDY24892	Canola	nucleus	42.35	41.22
GSMUA_Achr7P19340_001	Banana	nucleus	15.49	41.15
Bra034482.1-P	Field mustard	nucleus	40.39	40.63
CDY08634	Canola	nucleus	39.8	40.36
KRH22585	Soybean	nucleus	48.43	40.23
GSMUA_Achr2P18390_001	Banana	nucleus	28.82	40.05
Solyc07g051840.2.1	Tomato	nucleus	48.43	39.14
KRH25355	Soybean	nucleus	47.06	39.09
Zm00001d039245_P001	Maize	nucleus	39.8	37.52
KRH56160	Soybean	nucleus	46.08	37.42
TraesCS3A01G167200.1	Wheat	nucleus	41.18	36.52
TraesCS3B01G199000.2	Wheat	nucleus	40.98	36.03
EES02155	Sorghum	nucleus	40.2	35.96
GSMUA_Achr7P08850_001	Banana	nucleus	27.06	35.57
GSMUA_Achr10P...	Banana	nucleus	16.08	35.34
GSMUA_Achr1P05240_001	Banana	nucleus	21.57	33.74
TraesCS3D01G173300.2	Wheat	plastid	41.18	33.02
HORVU3Hr1G033740.2	Barley	nucleus, plastid	40.59	32.91
GSMUA_Achr5P16460_001	Banana	nucleus	15.1	32.77
GSMUA_Achr7P13400_001	Banana	nucleus	25.49	32.42
GSMUA_Achr10P...	Banana	nucleus	23.92	32.36
GSMUA_Achr2P05100_001	Banana	nucleus	11.76	31.58
GSMUA_Achr11P...	Banana	nucleus	15.1	31.43
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	17.06	30.1
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	13.14	30.04
GSMUA_Achr7P05200_001	Banana	nucleus	15.88	28.93
GSMUA_Achr3P20290_001	Banana	nucleus	21.37	28.46
GSMUA_Achr10P...	Banana	nucleus	15.88	28.12
GSMUA_Achr6P02330_001	Banana	nucleus	19.41	26.83
GSMUA_Achr3P13440_001	Banana	nucleus	14.31	26.55
GSMUA_Achr7P18820_001	Banana	nucleus	22.75	25.84
GSMUA_Achr10P...	Banana	nucleus	23.53	25.05
GSMUA_Achr1P10080_001	Banana	nucleus	16.27	24.78
Os01t0246700-01	Rice	nucleus	18.63	23.0
GSMUA_Achr5P09730_001	Banana	nucleus	20.98	15.03

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr10G26050_001	EnsemblPlants:GSMUA_Achr10P26050_001	EnsemblPlants:GSMUA_Achr10T26050_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0RLH9	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002969234	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 42 [Source:GMGC_GENE;Acc:GSMUA_Achr10G26050_001]

Coordinates

chr10:-:29789032..29791244

Molecular Weight (calculated)

54706.7 Da

IEP (calculated)

6.765

GRAVY (calculated)

-0.644

Length

510 amino acids

Sequence
(BLAST)

001: MDKGGTTGVG LTLNTSGSFF VPSTLDHRGG GLGRHRSMGS DLNHLCSSSG GSEFTDMTRV AVNEMDFFSE ERKKAFSKVE NDLDLMLPSS CVKKEDLTIH
101: TGLNLLTANA GNDESMVDNK LSPTKDHKES KTELAAMESE LARVKEENQK LQEMVEQATT NYNALQKHLV ALMRQQHQSN RHPPRDHEEH GGVLVPRQFM
201: DLGAAVEADE PSHSSTASQD RPPGSTDHRL HGGSNKKEIA PPDHGSSFRE EKPDHPNKAP KLTPAGVTEQ AQEAIMRKAR VSVRARSEAP MITDGCQWRK
301: YGQKMAKGNP CPRAYYRCTM ASGCPVRKQV QRCAEDRSIL ITTYEGTHNH PLPPAAMAMA STTSAAASML LSGSIMATIS ASAPFPTVTL DLTHSPNAAQ
401: LQRPPTQFQI FGQALYDPSK FSSLQSALPP SSLTDTVSAA TAAITADPNF TAALAAAISS IIGGNHQAAS HNDDTKSSAN KTTSDGNDDD KTNNSKDDAS
501: NSASPNFPAA

Best Arabidopsis Sequence Match ( AT4G22070.4 )
(BLAST)

001: MFRFPVSLGG SRDEDRHDQI TPLDDHRVVV DEVDFFSEKR DRVSRENIND DDDEGNKVLI KMEGSRVEEN DRSRDVNIGL NLLTANTGSD ESTVDDGLSM
101: DMEDKRAKIE NAQLQEELKK MKIENQRLRD MLSQATTNFN ALQMQLVAVM RQQEQRNSSQ DHLLAQESKA EGRKRQELQI MVPRQFMDLG PSSGAAEHGA
201: EVSSEERTTV RSGSPPSLLE SSNPRENGKR LLGREESSEE SESNAWGNPN KVPKHNPSSS NSNGNRNGNV IDQSAAEATM RKARVSVRAR SEAAMISDGC
301: QWRKYGQKMA KGNPCPRAYY RCTMAGGCPV RKQVQRCAED RSILITTYEG NHNHPLPPAA TAMASTTTAA ASMLLSGSMS SQDGLMNPTN LLARAILPCS
401: SSMATISASA PFPTITLDLT NSPNGNNPNM TTNNPLMQFA QRPGFNPAVL PQVVGQAMYN NQQQSKFSGL QLPAQPLQIA ATSSVAESVS AASAAIASDP
501: NFAAALAAAI TSIMNGSSHQ NNNTNNNNVA TSNNDSRQ

Arabidopsis Description

WRKY31Probable WRKY transcription factor 31 [Source:UniProtKB/Swiss-Prot;Acc:Q93WT0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.