Factsheet for TraesCS3D01G173300.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G167200.1	Wheat	nucleus	89.31	98.78
TraesCS3B01G199000.2	Wheat	nucleus	88.99	97.59
HORVU3Hr1G033740.2	Barley	nucleus, plastid	93.55	94.59
Os01t0246700-01	Rice	nucleus	50.47	77.72
Zm00001d039245_P001	Maize	nucleus	54.56	64.14
EES02155	Sorghum	nucleus	55.82	62.28
CDX97845	Canola	nucleus	19.03	50.21
GSMUA_Achr3P03090_001	Banana	nucleus	30.03	50.0
GSMUA_Achr5P16750_001	Banana	nucleus	35.38	46.3
Solyc02g032950.2.1	Tomato	nucleus	36.01	45.98
PGSC0003DMT400056725	Potato	nucleus	35.22	45.16
VIT_10s0116g01200.t01	Wine grape	nucleus	36.79	43.74
GSMUA_Achr10P...	Banana	nucleus	33.8	43.35
GSMUA_Achr2P15200_001	Banana	nucleus	36.16	43.23
Solyc02g080890.2.1	Tomato	nucleus	37.11	42.91
PGSC0003DMT400042400	Potato	nucleus	37.26	42.86
GSMUA_Achr6P13630_001	Banana	nucleus	35.22	42.75
GSMUA_Achr6P05880_001	Banana	nucleus	31.6	42.23
GSMUA_Achr10P...	Banana	nucleus	33.02	41.18
KRH02033	Soybean	nucleus	31.13	40.49
KRH36485	Soybean	nucleus	34.28	40.3
VIT_12s0059g00880.t01	Wine grape	nucleus	37.11	39.8
CDX82900	Canola	nucleus	32.55	39.73
KRH11472	Soybean	nucleus	34.75	39.68
PGSC0003DMT400038852	Potato	nucleus	34.75	39.68
KRH51128	Soybean	nucleus, plastid	32.08	39.46
AT1G62300.1	Thale cress	nucleus	34.28	39.42
AT4G04450.1	Thale cress	nucleus	32.55	39.2
CDY19535	Canola	nucleus	33.65	38.77
CDY12937	Canola	nucleus	33.65	38.77
AT4G22070.1	Thale cress	nucleus	32.7	38.66
CDY21301	Canola	nucleus	30.82	38.66
Bra027057.1-P	Field mustard	nucleus	33.49	38.59
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	29.56	38.52
Bra013584.1-P	Field mustard	nucleus	32.55	38.48
CDX90863	Canola	nucleus	30.66	38.46
Bra034482.1-P	Field mustard	nucleus	30.5	38.26
Bra000793.1-P	Field mustard	nucleus	31.13	38.15
CDY24892	Canola	nucleus	31.13	37.79
CDX94553	Canola	nucleus	28.93	37.47
CDY08634	Canola	nucleus	29.56	37.38
KRH22585	Soybean	nucleus	35.69	36.97
CDY16669	Canola	nucleus	28.46	36.79
Solyc07g051840.2.1	Tomato	nucleus	35.85	36.13
Bra029491.1-P	Field mustard	nucleus	27.83	35.98
KRH25355	Soybean	nucleus	33.18	34.36
KRH56160	Soybean	nucleus	33.49	33.92
TraesCS1D01G412500.1	Wheat	nucleus	30.82	33.16
TraesCS3D01G113300.1	Wheat	nucleus	23.27	30.08
TraesCS7D01G092500.2	Wheat	nucleus	25.31	27.24
TraesCS7D01G092600.1	Wheat	nucleus	25.63	26.94
TraesCS7D01G497400.1	Wheat	nucleus	13.05	25.38
TraesCS5D01G232800.1	Wheat	nucleus	13.21	25.38
TraesCS6D01G136200.1	Wheat	nucleus	13.84	25.29
TraesCS5D01G232700.1	Wheat	nucleus	10.69	25.09
TraesCS7D01G497800.1	Wheat	nucleus	12.26	23.93
TraesCS6D01G306300.1	Wheat	nucleus	20.75	23.61
TraesCS5D01G232900.1	Wheat	nucleus	13.68	23.45
TraesCS7D01G497700.1	Wheat	nucleus	11.95	23.17
TraesCS7D01G497300.1	Wheat	plastid	13.05	22.31
TraesCS7D01G092300.1	Wheat	nucleus	21.07	22.15
TraesCS7D01G092400.1	Wheat	nucleus	20.91	21.98

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS3D01G173300
EnsemblPlants:TraesCS3D01G173300.2	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr3D:-:154179658..154182152

Molecular Weight (calculated)

66661.2 Da

IEP (calculated)

7.634

GRAVY (calculated)

-0.514

Length

636 amino acids

Sequence
(BLAST)

001: MSDLGLPASS PFFIRAPSYR GETSDSSLFR SLRHVSFSLP LPLPLPSASK ASLSSPGRLS ICMDKGHLGG GGGGGGLLAL DASPRQLGFL NLLSPAPFHR
101: SMEADDGGGG GGGRGRRSIE VDFFSDEKKN MKKSRASAGA DADDHKDQAS AAGLAIKKED LTINLLPGNN TRSDRSMVVD DDGASRADED RNGRNTGELA
201: AMQAELSRMN EENQRLRGML TQVNNSYHAL QMHLVALMQQ RTQMPPVQPQ QPPTQEDGKN ESAIVPRQFL GLGPSGASAD VAEEPSNSST EVGSPRRSSS
301: NGNEDPERGD NPDGPSTAGW LPGRGMTQQQ QQLGAAAKGH DQQAQEATMR KARVSVRARS EAPIIADGCQ WRKYGQKMAK GNPCPRAYYR CTMATGCPVR
401: KQVQRCAEDR TILITTYEGT HNHPLPPAAM AMASTTSAAA SMLLSGSMPS ADGAGLMSSN FLARTVLPCS SSMATISASA PFPTVTLDLT HAPPGAPNAM
501: PLNVARPHAP GQFHVPMPGG GMAPAFAMPP HMLYNQSKFS GLQMSSDSVD AGQFAQPRPP MGLPGQLSDT VSAAAAAITA DPNFTVALAA AISSIMAGQH
601: AAGNSNANNS NNNTSNNNVM TTSNNTTSNN TNSETQ

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.