Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES02155 | Sorghum | nucleus | 83.36 | 79.12 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 63.96 | 60.17 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 63.77 | 59.48 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 63.59 | 54.69 |
| TraesCS3D01G173300.2 | Wheat | plastid | 64.14 | 54.56 |
| Os01t0246700-01 | Rice | nucleus | 40.11 | 52.54 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 34.2 | 48.43 |
| CDX97845 | Canola | nucleus | 21.26 | 47.72 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 38.26 | 42.59 |
| GSMUA_Achr10P... | Banana | nucleus | 38.82 | 42.34 |
| Solyc02g032950.2.1 | Tomato | nucleus | 38.45 | 41.77 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 40.11 | 41.41 |
| PGSC0003DMT400056725 | Potato | nucleus | 37.89 | 41.33 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 36.04 | 40.97 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 39.56 | 40.23 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 39.56 | 40.0 |
| GSMUA_Achr10P... | Banana | nucleus | 37.52 | 39.8 |
| Solyc02g080890.2.1 | Tomato | nucleus | 40.11 | 39.45 |
| PGSC0003DMT400042400 | Potato | nucleus | 40.11 | 39.24 |
| CDX82900 | Canola | nucleus | 36.97 | 38.39 |
| KRH02033 | Soybean | nucleus | 34.01 | 37.63 |
| AT4G22070.1 | Thale cress | nucleus | 37.34 | 37.55 |
| VIT_12s0059g00880.t01 | Wine grape | nucleus | 40.85 | 37.27 |
| AT1G62300.1 | Thale cress | nucleus | 38.08 | 37.25 |
| KRH51128 | Soybean | nucleus, plastid | 35.49 | 37.14 |
| CDY24892 | Canola | nucleus | 35.86 | 37.02 |
| Bra013584.1-P | Field mustard | nucleus | 36.78 | 36.99 |
| KRH36485 | Soybean | nucleus | 36.78 | 36.78 |
| Bra034482.1-P | Field mustard | nucleus | 34.2 | 36.49 |
| PGSC0003DMT400038852 | Potato | nucleus | 37.52 | 36.45 |
| AT4G04450.1 | Thale cress | nucleus | 35.3 | 36.17 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 32.53 | 36.07 |
| CDY19535 | Canola | nucleus | 36.78 | 36.05 |
| CDY12937 | Canola | nucleus | 36.78 | 36.05 |
| CDY08634 | Canola | nucleus | 33.46 | 35.98 |
| Bra027057.1-P | Field mustard | nucleus | 36.6 | 35.87 |
| KRH11472 | Soybean | nucleus | 36.78 | 35.73 |
| CDY21301 | Canola | nucleus | 33.46 | 35.7 |
| CDX90863 | Canola | nucleus | 33.27 | 35.5 |
| CDX94553 | Canola | nucleus | 32.16 | 35.44 |
| Bra000793.1-P | Field mustard | nucleus | 33.64 | 35.07 |
| CDY16669 | Canola | nucleus | 31.42 | 34.55 |
| Bra029491.1-P | Field mustard | nucleus | 30.87 | 33.94 |
| Solyc07g051840.2.1 | Tomato | nucleus | 39.0 | 33.44 |
| KRH22585 | Soybean | nucleus | 37.52 | 33.06 |
| KRH25355 | Soybean | nucleus | 36.78 | 32.41 |
| KRH56160 | Soybean | nucleus | 36.97 | 31.85 |
| Zm00001d008190_P001 | Maize | nucleus | 28.84 | 30.77 |
| Zm00001d024768_P001 | Maize | nucleus | 30.31 | 29.98 |
| Zm00001d009595_P001 | Maize | nucleus | 33.09 | 29.34 |
| Zm00001d039044_P001 | Maize | nucleus | 33.83 | 29.14 |
| Zm00001d040554_P001 | Maize | nucleus | 31.24 | 29.09 |
| Zm00001d011237_P001 | Maize | nucleus | 15.34 | 27.85 |
| Zm00001d008794_P001 | Maize | nucleus | 27.73 | 27.78 |
| Zm00001d039532_P001 | Maize | nucleus | 26.43 | 26.14 |
| Zm00001d045375_P001 | Maize | nucleus | 11.65 | 25.2 |
| Zm00001d020492_P001 | Maize | nucleus | 13.86 | 24.83 |
| Zm00001d020495_P001 | Maize | nucleus | 12.01 | 24.44 |
| Zm00001d053746_P001 | Maize | nucleus | 14.23 | 23.99 |
| Zm00001d046805_P001 | Maize | nucleus | 14.6 | 22.51 |
| Zm00001d015515_P001 | Maize | nucleus | 13.86 | 21.61 |
| Zm00001d005749_P001 | Maize | nucleus | 13.86 | 21.37 |
| Zm00001d036726_P001 | Maize | nucleus | 13.49 | 21.22 |
| Zm00001d018203_P001 | Maize | nucleus | 22.37 | 20.9 |
Protein Annotations
| EntrezGene:103649526 | MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A1D6MEQ0 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| ProteinID:ONM28114.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 |
| SUPFAM:SSF118290 | UniParc:UPI0004DE8B7A | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | EnsemblPlantsGene:Zm00001d039245 | EnsemblPlants:Zm00001d039245_P001 |
| EnsemblPlants:Zm00001d039245_T001 | SEG:seg | : | : | : | : |
Description
WRKY-transcription factor 93WRKY transcription factor 6
Coordinates
chr3:-:474649..476986
Molecular Weight (calculated)
56670.2 Da
IEP (calculated)
7.360
GRAVY (calculated)
-0.512
Length
541 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKAHLGGGL LALDASPRPL GFLNLLSPPT SSPPFHRTRT MEADDVPAVP GNKGRRSIEV DFFSDDKDKK SAAAAANDKK EDLTTINLLP GSNANDDDDD
101: EAATRLRLPN DQDRQNRNTN ELSAMQSELA RMNDENQRLR GMLTQVTTSY QALQMHLVAL MQARADGQPM MPPAVAQTLP VTDAAAVMPS PRQFLGLGPA
201: AAAEETSNSS TEVGSPRPSS SAGRRQDQQQ QAAERGDSPD PADPSTTARQ LAQQQEASMR KARVSVRARS EAPIIADGCQ WRKYGQKMAK GNPCPRAYYR
301: CTMANGCPVR KQVQRCADDR SILITTYEGT HNHPLPPAAV AMASTTSAAA SMLLSGSMPS GDNFLARAVL PCSSGMATIS ASAPFPTVTL DLTNGPPGAP
401: PPARPPPHLQ AAALYSATHQ ASSKFSGLHM SSSSTSDNIN NVGTTTRVVA PDAPPHMNTV TAAAAAAIAS DPNFTVALAA AITSIIGGGG HPVPIPIHHG
501: GQGQGRQQQG LTPTSNSNAN NNNAVVTSSS NNTATSNSET Q
101: EAATRLRLPN DQDRQNRNTN ELSAMQSELA RMNDENQRLR GMLTQVTTSY QALQMHLVAL MQARADGQPM MPPAVAQTLP VTDAAAVMPS PRQFLGLGPA
201: AAAEETSNSS TEVGSPRPSS SAGRRQDQQQ QAAERGDSPD PADPSTTARQ LAQQQEASMR KARVSVRARS EAPIIADGCQ WRKYGQKMAK GNPCPRAYYR
301: CTMANGCPVR KQVQRCADDR SILITTYEGT HNHPLPPAAV AMASTTSAAA SMLLSGSMPS GDNFLARAVL PCSSGMATIS ASAPFPTVTL DLTNGPPGAP
401: PPARPPPHLQ AAALYSATHQ ASSKFSGLHM SSSSTSDNIN NVGTTTRVVA PDAPPHMNTV TAAAAAAIAS DPNFTVALAA AITSIIGGGG HPVPIPIHHG
501: GQGQGRQQQG LTPTSNSNAN NNNAVVTSSS NNTATSNSET Q
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.