Factsheet for Zm00001d024768_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0137500-00	Rice	nucleus	42.6	49.16
Zm00001d040554_P001	Maize	nucleus	47.35	44.58
Zm00001d008190_P001	Maize	nucleus	39.12	42.21
GSMUA_Achr2P18390_001	Banana	nucleus	26.69	39.78
KXG21247	Sorghum	nucleus	40.77	39.33
VIT_07s0005g02570.t01	Wine grape	nucleus	35.65	38.54
GSMUA_Achr11P...	Banana	nucleus	28.7	37.47
KRG96611	Soybean	nucleus	34.92	37.02
KRH69145	Soybean	nucleus	31.81	35.95
KRH33656	Soybean	nucleus	31.44	35.61
KRH68345	Soybean	endoplasmic reticulum, vacuole	35.1	35.49
Zm00001d039245_P001	Maize	nucleus	29.98	30.31
Zm00001d011237_P001	Maize	nucleus	15.72	28.86
Zm00001d053746_P001	Maize	nucleus	16.09	27.41
Zm00001d009595_P001	Maize	nucleus	29.43	26.39
Zm00001d020492_P001	Maize	nucleus	14.44	26.16
Zm00001d015515_P001	Maize	nucleus	15.9	25.07
Zm00001d036726_P001	Maize	nucleus	15.54	24.71
Zm00001d008794_P001	Maize	nucleus	24.31	24.63
Zm00001d020495_P001	Maize	nucleus	11.88	24.44
Zm00001d045375_P001	Maize	nucleus	11.15	24.4
Zm00001d039044_P001	Maize	nucleus	27.97	24.36
Zm00001d039532_P001	Maize	nucleus	24.13	24.13
Zm00001d046805_P001	Maize	nucleus	14.81	23.08
Zm00001d018203_P001	Maize	nucleus	23.03	21.76
Zm00001d005749_P001	Maize	nucleus	13.35	20.8

Protein Annotations

EntrezGene:103641355	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A1D6J1S5	ProteinID:AQK42001.1	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF29	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0004DE8582	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	EnsemblPlantsGene:Zm00001d024768	EnsemblPlants:Zm00001d024768_P001
EnsemblPlants:Zm00001d024768_T001	SEG:seg	:	:	:	:

Description

Putative WRKY DNA-binding domain superfamily protein

Coordinates

chr10:-:87223395..87228172

Molecular Weight (calculated)

55920.3 Da

IEP (calculated)

6.553

GRAVY (calculated)

-0.450

Length

547 amino acids

Sequence
(BLAST)

001: MDLVPKHQQQ QQQRGIKEEE EMTVFAEHGD QQATSGAGHG GGGGRRSEIK EVDFFSAAAG GAVSRRITDE DDGGEDGGRE PAGAVARGCR NTTVNTALDL
101: LTRPAAGDGG EGTAASGRDD DTEMDVAAVE GELRQAGEEN RQLRRMLEEL TRSYGALYHQ LIQAQAAQHH HHQASGAAKP MLPTSGVQFM DPAGRVPPPP
201: APAMAAGAAF SGERGGDSEG GSGSGGEAGP NDGTGTPERG ENADNRAPAP AEAPLRRARV SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA
301: TGCPVRKQVQ RCAEDKAVLI TTYEGTHSHQ LPPQAAAMAK TTSAAAAMLL SGPAVSRDAG ALFAGHHVAA PLFAQYHPYA SAATLSASAP FPTITLDLTH
401: SPPPPAAGLL QHRLPTPPVP AMPFPMPYGF PGAGGHRLAA APVPAPHPPA GATLLGLDGR NRSALDTMTA AIASDPNFTT ALAAALSTIM AGAGGAEPQA
501: PHLSGAADAS GDGGNGSAGT GPATAAAAGA RETALHALLQ RLNDSRQ

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.