CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33656	Soybean	nucleus	86.36	86.54
KRG96611	Soybean	nucleus	54.96	51.55
KRH68345	Soybean	endoplasmic reticulum, vacuole	55.58	49.72
VIT_07s0005g02570.t01	Wine grape	nucleus	51.24	49.01
KRG89544	Soybean	nucleus	15.29	45.4
GSMUA_Achr2P18390_001	Banana	nucleus	29.55	38.96
Os05t0137500-00	Rice	nucleus	36.98	37.76
GSMUA_Achr11P...	Banana	nucleus	30.58	35.32
KRH02502	Soybean	nucleus	28.51	35.29
KRH19450	Soybean	nucleus	27.48	34.73
Os01t0289600-00	Rice	nucleus, plastid	29.34	34.55
KRH02033	Soybean	nucleus	34.71	34.36
KRH51128	Soybean	nucleus, plastid	36.36	34.04
Zm00001d040554_P001	Maize	nucleus	40.08	33.39
KRH36485	Soybean	nucleus	36.78	32.9
EES00609	Sorghum	nucleus	39.26	32.65
Zm00001d008190_P001	Maize	nucleus	33.47	31.95
Zm00001d024768_P001	Maize	nucleus	35.95	31.81
KRH42243	Soybean	nucleus	11.57	30.94
KRH11472	Soybean	nucleus	35.33	30.7
KRH73787	Soybean	nucleus	26.45	30.48
KRH15674	Soybean	nucleus	17.56	30.14
KRG98705	Soybean	nucleus	29.13	29.5
KRH47344	Soybean	nucleus	18.59	28.94
KRH23643	Soybean	nucleus	18.39	28.8
KRH12664	Soybean	nucleus	26.65	28.6
KRH46231	Soybean	nucleus	28.72	28.6
KRH44560	Soybean	nucleus	17.98	27.8
KRG93506	Soybean	nucleus	28.1	27.76
KRH25355	Soybean	nucleus	35.12	27.69
KRH38314	Soybean	nucleus	13.84	27.69
KRH37650	Soybean	nucleus	26.03	27.51
KRH22585	Soybean	nucleus	34.71	27.36
KRH05350	Soybean	nucleus	17.36	26.92
KRH56160	Soybean	nucleus	34.92	26.91
KRH61669	Soybean	nucleus	12.19	26.82
KXG21247	Sorghum	nucleus	30.37	25.93
KRH09652	Soybean	nucleus	17.56	25.76
KRH33270	Soybean	nucleus	15.91	25.25
KRH61668	Soybean	nucleus	12.19	25.11
KRH01137	Soybean	nucleus	27.69	24.77
KRH63398	Soybean	nucleus	26.86	24.48
KRH56941	Soybean	nucleus	28.1	24.33
KRH40121	Soybean	nucleus	27.07	24.21
KRH58361	Soybean	nucleus	23.97	23.92
KRH03442	Soybean	nucleus	29.13	23.5
KRH74791	Soybean	nucleus	24.59	23.38
KRH54509	Soybean	nucleus	29.55	23.25
KRG99150	Soybean	nucleus	25.21	23.06
KRH69334	Soybean	nucleus	25.0	22.96
KRH54838	Soybean	cytosol, nucleus	10.95	22.55
KRH05362	Soybean	nucleus	12.81	22.3
KRH15655	Soybean	nucleus	12.81	22.3
KRH52329	Soybean	nucleus	13.22	20.71

Protein Annotations

EntrezGene:100785933	MapMan:15.5.22	Gene3D:2.20.25.80	EMBL:ACUP02000689	ncoils:Coil	EnsemblPlantsGene:GLYMA_02G007500
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:K7K5U2	EnsemblPlants:KRH69145	ProteinID:KRH69145	ProteinID:KRH69145.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF30	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000233797A
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:777356..781686

Molecular Weight (calculated)

52859.6 Da

IEP (calculated)

8.416

GRAVY (calculated)

-0.509

Length

484 amino acids

Sequence
(BLAST)

001: MENHHQILQQ PNREFTLLRS TDFLRQNLNL DPPTVNTGKH VDPSIKEVDF FSSSSSPPKN SGTYNSSQEE SRDRRTNMAK DDRSPTLFND QLVNTALNLS
101: PGAGVSRSAA NDENLKTLLN TLQRESLRLQ EENCKLRTML DQITKNNYQL QLFIALQKQK QCQKVETNSM ICGQHLLDPR PCTKLDAQVA SFPDDKSGQQ
201: GDPVEDVLEQ TSSHSWGSSK SPTFEKSKPS ELPFKKTRVS VRAKSEAPLI SDGCQWRKYG QKIAKGNPCP RAYYRCTMAV GCPVRKQVQR CMEDKTVLIT
301: TYEGNHNHPL PPSATVMANS TSAAAAMLLS SSCSISNTEA LSNTVGVFSS MPYIPMATLS TSAPFPTITL DMTTNPMQLH RETSSALTSL LPLHATSIPQ
401: LLGHPVIFPH KMPHPLGQQQ QPLFLNETMS AAIASNPNFT IALAAAISSI IGAPRGTDGN NNNSSNGGSH VLPLNGASML PGST

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.