Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH61668 | Soybean | nucleus | 71.91 | 71.91 |
| KRH05362 | Soybean | nucleus | 58.3 | 49.28 |
| KRH15655 | Soybean | nucleus | 56.17 | 47.48 |
| VIT_04s0008g05750.t01 | Wine grape | nucleus | 40.0 | 36.02 |
| KRH52329 | Soybean | nucleus | 35.74 | 27.18 |
| KRH61669 | Soybean | nucleus | 23.83 | 25.45 |
| KRH15674 | Soybean | nucleus | 29.79 | 24.82 |
| KRH47344 | Soybean | nucleus | 32.34 | 24.44 |
| KRH44560 | Soybean | nucleus | 32.34 | 24.28 |
| KRG89544 | Soybean | nucleus | 16.6 | 23.93 |
| KRH23643 | Soybean | nucleus | 30.64 | 23.3 |
| KRH05350 | Soybean | nucleus | 30.21 | 22.76 |
| KRH09652 | Soybean | nucleus | 30.21 | 21.52 |
| KRH38314 | Soybean | nucleus | 14.47 | 14.05 |
| KRH42243 | Soybean | nucleus | 10.64 | 13.81 |
| KRH19450 | Soybean | nucleus | 20.85 | 12.79 |
| KRH02502 | Soybean | nucleus | 20.85 | 12.53 |
| KRG93506 | Soybean | nucleus | 25.53 | 12.24 |
| KRH73787 | Soybean | nucleus | 21.28 | 11.9 |
| KRG98705 | Soybean | nucleus | 23.4 | 11.51 |
| KRH33270 | Soybean | nucleus | 14.89 | 11.48 |
| KRH02033 | Soybean | nucleus | 23.83 | 11.45 |
| KRH63398 | Soybean | nucleus | 25.53 | 11.3 |
| KRH69145 | Soybean | nucleus | 22.55 | 10.95 |
| KRH33656 | Soybean | nucleus | 22.13 | 10.77 |
| KRH46231 | Soybean | nucleus | 22.13 | 10.7 |
| KRH51128 | Soybean | nucleus, plastid | 23.4 | 10.64 |
| KRH36485 | Soybean | nucleus | 24.26 | 10.54 |
| KRH56941 | Soybean | nucleus | 24.68 | 10.38 |
| KRH37650 | Soybean | nucleus | 20.0 | 10.26 |
| KRH74791 | Soybean | nucleus | 22.13 | 10.22 |
| KRH12664 | Soybean | nucleus | 19.57 | 10.2 |
| KRH40121 | Soybean | nucleus | 23.4 | 10.17 |
| KRH11472 | Soybean | nucleus | 23.83 | 10.05 |
| KRH03442 | Soybean | nucleus | 25.53 | 10.0 |
| KRH01137 | Soybean | nucleus | 22.98 | 9.98 |
| KRG96611 | Soybean | nucleus | 21.7 | 9.88 |
| KRH69334 | Soybean | nucleus | 22.13 | 9.87 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 22.55 | 9.8 |
| KRH54509 | Soybean | nucleus | 25.53 | 9.76 |
| KRG99150 | Soybean | nucleus | 21.7 | 9.64 |
| KRH58361 | Soybean | nucleus | 19.57 | 9.48 |
| KRH25355 | Soybean | nucleus | 24.68 | 9.45 |
| KRH56160 | Soybean | nucleus | 24.68 | 9.24 |
| KRH22585 | Soybean | nucleus | 23.4 | 8.96 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | UniProt:A0A0R0JK30 | EMBL:ACUP02003588 | EnsemblPlantsGene:GLYMA_06G212900 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 |
| EnsemblPlants:KRH54838 | ProteinID:KRH54838 | ProteinID:KRH54838.1 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0006EE01E3 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
Description
hypothetical protein
Coordinates
chr6:-:21419807..21420820
Molecular Weight (calculated)
26469.5 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.690
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: ETLSSKCEKL QSHFQEINNE EQKVGTKSDQ SGSVLLARPE FSMAQKPSQI FFKTHPKDNS LMVKDGYQWK KYGQKKVTKD NPSPRAYFEC SLAPSCSNLK
101: KVQRSIQDKS ILVATYEGKH NHGVFHDLLK PSSSIPETSI MINNLPITNM PNDKDTLNID LALCNSDQTD IRLCDDVKQQ NHRGSKSKIE EYVTPLVKDP
201: DFIMPLAEAV AHSLKSQTYK QVGLNLNLGL PEPHL
101: KVQRSIQDKS ILVATYEGKH NHGVFHDLLK PSSSIPETSI MINNLPITNM PNDKDTLNID LALCNSDQTD IRLCDDVKQQ NHRGSKSKIE EYVTPLVKDP
201: DFIMPLAEAV AHSLKSQTYK QVGLNLNLGL PEPHL
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.