Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15655 | Soybean | nucleus | 86.69 | 86.69 |
| KRH54838 | Soybean | cytosol, nucleus | 49.28 | 58.3 |
| KRH61668 | Soybean | nucleus | 46.04 | 54.47 |
| VIT_04s0008g05750.t01 | Wine grape | nucleus | 44.24 | 47.13 |
| KRH44560 | Soybean | nucleus | 34.17 | 30.35 |
| KRH47344 | Soybean | nucleus | 33.81 | 30.23 |
| KRH61669 | Soybean | nucleus | 23.38 | 29.55 |
| KRH23643 | Soybean | nucleus | 32.37 | 29.13 |
| KRH15674 | Soybean | nucleus | 28.78 | 28.37 |
| KRH52329 | Soybean | nucleus | 31.3 | 28.16 |
| KRH09652 | Soybean | nucleus | 32.01 | 26.97 |
| KRH05350 | Soybean | nucleus | 28.78 | 25.64 |
| KRG89544 | Soybean | nucleus | 13.67 | 23.31 |
| KRH38314 | Soybean | nucleus | 16.19 | 18.59 |
| KRH42243 | Soybean | nucleus | 11.15 | 17.13 |
| KRH19450 | Soybean | nucleus | 22.3 | 16.19 |
| KRH02502 | Soybean | nucleus | 22.3 | 15.86 |
| KRG93506 | Soybean | nucleus | 25.18 | 14.29 |
| KRH68345 | Soybean | endoplasmic reticulum, vacuole | 26.62 | 13.68 |
| KRH02033 | Soybean | nucleus | 23.74 | 13.5 |
| KRH36485 | Soybean | nucleus | 26.26 | 13.49 |
| KRH63398 | Soybean | nucleus | 25.54 | 13.37 |
| KRH51128 | Soybean | nucleus, plastid | 24.82 | 13.35 |
| KRH73787 | Soybean | nucleus | 20.14 | 13.33 |
| KRH11472 | Soybean | nucleus | 26.26 | 13.11 |
| KRH33656 | Soybean | nucleus | 22.66 | 13.04 |
| KRG96611 | Soybean | nucleus | 24.1 | 12.98 |
| KRH69145 | Soybean | nucleus | 22.3 | 12.81 |
| KRG98705 | Soybean | nucleus | 21.94 | 12.76 |
| KRH46231 | Soybean | nucleus | 22.3 | 12.76 |
| KRH22585 | Soybean | nucleus | 26.98 | 12.21 |
| KRH25355 | Soybean | nucleus | 26.98 | 12.21 |
| KRH01137 | Soybean | nucleus | 23.74 | 12.2 |
| KRH03442 | Soybean | nucleus | 26.26 | 12.17 |
| KRH58361 | Soybean | nucleus | 21.22 | 12.16 |
| KRH56941 | Soybean | nucleus | 24.46 | 12.16 |
| KRH33270 | Soybean | nucleus | 13.31 | 12.13 |
| KRH40121 | Soybean | nucleus | 23.38 | 12.01 |
| KRH37650 | Soybean | nucleus | 19.78 | 12.01 |
| KRH12664 | Soybean | nucleus | 19.42 | 11.97 |
| KRH54509 | Soybean | nucleus | 25.9 | 11.71 |
| KRH56160 | Soybean | nucleus | 26.26 | 11.62 |
| KRH74791 | Soybean | nucleus | 20.86 | 11.39 |
| KRH69334 | Soybean | nucleus | 21.58 | 11.39 |
| KRG99150 | Soybean | nucleus | 20.86 | 10.96 |
Protein Annotations
| EntrezGene:100170679 | MapMan:15.5.22 | Gene3D:2.20.25.80 | EMBL:ACUP02010730 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G222500 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | UniProt:I1MX45 |
| InterPro:IPR003657 | InterPro:IPR036576 | EnsemblPlants:KRH05362 | ProteinID:KRH05362 | ProteinID:KRH05362.1 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF38 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00023D56D8 |
| InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:37539829..37542155
Molecular Weight (calculated)
31610.9 Da
IEP (calculated)
8.580
GRAVY (calculated)
-0.654
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVQLFNTEI IMDEKVETIK AELKRVREEN NTLRMMLEVL SSKYTKLETH LQEINKTQHK GMSSNQIGSV TVPPMFQTNK RPRLEFPTAK KPLQIFVKTH
101: PKDDSLIVKD GYQWRKYGQK VTKDNASPRA YFRCYMAPIC PAKKKVQRCL HDKSILVAIY DGEHSHGPLD ESSSSTPKGS SPVANNKLPL MTSVPNYIEA
201: MNIDLALSGW SQTDRRHCED VMQQNNNNGG SNIKIEEYVS SLIKDPDFTM SLAEAVARTI TGQQKQQDLN LNLELPEE
101: PKDDSLIVKD GYQWRKYGQK VTKDNASPRA YFRCYMAPIC PAKKKVQRCL HDKSILVAIY DGEHSHGPLD ESSSSTPKGS SPVANNKLPL MTSVPNYIEA
201: MNIDLALSGW SQTDRRHCED VMQQNNNNGG SNIKIEEYVS SLIKDPDFTM SLAEAVARTI TGQQKQQDLN LNLELPEE
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.