CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02033	Soybean	nucleus	82.4	87.12
KRH36485	Soybean	nucleus	64.22	61.37
KRH11472	Soybean	nucleus	65.57	60.86
Solyc02g032950.2.1	Tomato	nucleus	52.42	54.42
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	36.75	54.29
VIT_10s0116g01200.t01	Wine grape	nucleus	55.9	54.02
PGSC0003DMT400056725	Potato	nucleus	51.64	53.83
PGSC0003DMT400042400	Potato	nucleus	57.45	53.71
CDX97845	Canola	nucleus	24.95	53.53
GSMUA_Achr3P03090_001	Banana	nucleus	39.07	52.88
Solyc02g080890.2.1	Tomato	nucleus	56.09	52.73
GSMUA_Achr5P16750_001	Banana	nucleus	47.0	50.0
GSMUA_Achr10P...	Banana	nucleus	47.78	49.8
CDX82900	Canola	nucleus	49.52	49.14
Bra013584.1-P	Field mustard	nucleus	50.1	48.14
AT4G22070.1	Thale cress	nucleus	50.1	48.14
AT1G62300.1	Thale cress	nucleus	51.06	47.74
CDY19535	Canola	nucleus	50.48	47.28
CDY12937	Canola	nucleus	50.48	47.28
Bra027057.1-P	Field mustard	nucleus	50.48	47.28
GSMUA_Achr6P05880_001	Banana	nucleus	43.33	47.06
GSMUA_Achr6P13630_001	Banana	nucleus	47.58	46.95
CDY21301	Canola	nucleus	46.03	46.94
CDX90863	Canola	nucleus	46.03	46.94
GSMUA_Achr2P15200_001	Banana	nucleus	48.16	46.8
Bra000793.1-P	Field mustard	nucleus	46.62	46.44
CDX94553	Canola	nucleus	43.91	46.23
AT4G04450.1	Thale cress	nucleus	47.2	46.21
CDY16669	Canola	nucleus	43.91	46.14
GSMUA_Achr10P...	Banana	nucleus	45.45	46.08
KRG89544	Soybean	nucleus	14.51	46.01
Bra029491.1-P	Field mustard	nucleus	43.33	45.53
Bra034482.1-P	Field mustard	nucleus	42.75	43.59
KRH38314	Soybean	nucleus	20.31	43.39
CDY24892	Canola	nucleus	43.91	43.32
KRH22585	Soybean	nucleus	50.29	42.35
KRH25355	Soybean	nucleus	50.29	42.35
CDY08634	Canola	nucleus	41.01	42.15
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	38.88	41.19
KRH56160	Soybean	nucleus	49.52	40.76
KRH73787	Soybean	nucleus	31.33	38.57
KRH19450	Soybean	nucleus	27.85	37.6
KRH02502	Soybean	nucleus	28.05	37.08
KRH69145	Soybean	nucleus	34.04	36.36
KRH33656	Soybean	nucleus	33.85	36.23
TraesCS3A01G167200.1	Wheat	nucleus	39.65	35.65
KRG98705	Soybean	nucleus	32.88	35.56
Zm00001d039245_P001	Maize	nucleus	37.14	35.49
KRG96611	Soybean	nucleus	35.01	35.08
TraesCS3B01G199000.2	Wheat	nucleus	39.27	35.0
KRH46231	Soybean	nucleus	32.88	34.98
EES02155	Sorghum	nucleus	38.49	34.91
KRH68345	Soybean	endoplasmic reticulum, vacuole	36.17	34.57
KRH47344	Soybean	nucleus	20.31	33.76
KRH12664	Soybean	nucleus	29.21	33.48
KRH44560	Soybean	nucleus	20.12	33.23
HORVU3Hr1G033740.2	Barley	nucleus, plastid	39.07	32.11
TraesCS3D01G173300.2	Wheat	plastid	39.46	32.08
KRH23643	Soybean	nucleus	19.15	32.04
KRH37650	Soybean	nucleus	28.05	31.66
KRG93506	Soybean	nucleus	29.79	31.43
KRH15674	Soybean	nucleus	17.02	31.21
KRH42243	Soybean	nucleus	10.83	30.94
KRH61669	Soybean	nucleus	13.15	30.91
KRH09652	Soybean	nucleus	18.96	29.7
KRH05350	Soybean	nucleus	17.02	28.21
KRH61668	Soybean	nucleus	12.38	27.23
KRH56941	Soybean	nucleus	28.24	26.12
KRH63398	Soybean	nucleus	26.69	25.99
KRH03442	Soybean	nucleus	29.98	25.83
KRH33270	Soybean	nucleus	15.09	25.57
KRH01137	Soybean	nucleus	26.31	25.14
KRH40121	Soybean	nucleus	26.31	25.14
KRH05362	Soybean	nucleus	13.35	24.82
KRH54509	Soybean	nucleus	28.82	24.23
KRH15655	Soybean	nucleus	12.77	23.74
KRH54838	Soybean	cytosol, nucleus	10.64	23.4
KRH74791	Soybean	nucleus	23.02	23.38
KRG99150	Soybean	nucleus	23.4	22.87
KRH58361	Soybean	nucleus	21.28	22.68
KRH52329	Soybean	nucleus	13.35	22.33
KRH69334	Soybean	nucleus	22.44	22.01
Os01t0246700-01	Rice	nucleus	15.67	19.61

Protein Annotations

EntrezGene:100127382	MapMan:15.5.22	Gene3D:2.20.25.80	UniProt:A0A0R0JEE2	EMBL:ACUP02004727	ncoils:Coil
EnsemblPlantsGene:GLYMA_07G262700	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	EnsemblPlants:KRH51128	ProteinID:KRH51128	ProteinID:KRH51128.1	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31	SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00023C5828
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:43715349..43718655

Molecular Weight (calculated)

55871.2 Da

IEP (calculated)

6.788

GRAVY (calculated)

-0.575

Length

517 amino acids

Sequence
(BLAST)

001: MFMEWSLTLD SSHSSSSTTN HNMFPTLGFP VNLSPSSDHN RTVLGEVDFF SGARNISSSH TNNDHGTPLK CDPHVNTGLQ LLTANAGSDQ STVDDGASSD
101: AEDKLVKITE LARLQEDLRR MNAENQKLKE MLSHVSSNYA NLQMHLAAVL QQQHNQRTEN TEQEVVQGKA EERKHGGMVP PRQFLDLVPS GTTEIDDQVS
201: NSSLGERTRS TTPPSCNKND DKDKKETTDI PHSGKLLNHT TDPSTSPEAA MRKARVSVRA RSEAPMISDG CQWRKYGQKM AKGNPCPRAY YRCTMAVGCP
301: VRKQVQRCAE DRTILTTTYE GTHNHPLPPA AMAMASTTAA AASMLLSGSM TSADGIMNPN LLTRAILPCS SMATLSASAP FPTVTLDLTH NQNAFQNYQR
401: PQTPLFPSQP QDFIAGSTPP QLPQLIAQAL YNQSKFSGLQ LSQDVGPNNS QAPRPFLQPS QQVSLTDTIS AITADPNFTA ALVSAISSII GGANPNNNSA
501: NNSSSNPNVI NSATINQ

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.