Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P13630_001 | Banana | nucleus | 74.8 | 70.8 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 50.6 | 65.71 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 60.48 | 61.73 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 39.52 | 56.0 |
| CDX97845 | Canola | nucleus | 27.02 | 55.6 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 58.27 | 54.32 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 50.2 | 52.31 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 10.08 | 51.55 |
| Solyc02g032950.2.1 | Tomato | nucleus | 50.0 | 49.8 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 53.43 | 49.53 |
| KRH02033 | Soybean | nucleus | 48.79 | 49.49 |
| PGSC0003DMT400056725 | Potato | nucleus | 49.4 | 49.4 |
| GSMUA_Achr10P... | Banana | nucleus | 50.6 | 49.22 |
| KRH36485 | Soybean | nucleus | 53.02 | 48.61 |
| CDX82900 | Canola | nucleus | 50.4 | 47.98 |
| KRH51128 | Soybean | nucleus, plastid | 49.8 | 47.78 |
| PGSC0003DMT400042400 | Potato | nucleus | 52.82 | 47.38 |
| Bra013584.1-P | Field mustard | nucleus | 51.21 | 47.21 |
| PGSC0003DMT400038852 | Potato | nucleus | 52.82 | 47.04 |
| VIT_12s0059g00880.t01 | Wine grape | nucleus | 56.05 | 46.88 |
| KRH11472 | Soybean | nucleus | 52.62 | 46.86 |
| AT4G22070.1 | Thale cress | nucleus | 50.81 | 46.84 |
| Solyc02g080890.2.1 | Tomato | nucleus | 51.61 | 46.55 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 44.76 | 45.49 |
| AT4G04450.1 | Thale cress | nucleus | 47.98 | 45.08 |
| CDX90863 | Canola | nucleus | 45.97 | 44.97 |
| CDX94553 | Canola | nucleus | 44.35 | 44.81 |
| CDY21301 | Canola | nucleus | 45.77 | 44.77 |
| Bra000793.1-P | Field mustard | nucleus | 46.77 | 44.7 |
| CDY16669 | Canola | nucleus | 43.95 | 44.31 |
| GSMUA_Achr2P18390_001 | Banana | nucleus | 32.66 | 44.14 |
| AT1G62300.1 | Thale cress | nucleus | 48.79 | 43.76 |
| CDY19535 | Canola | nucleus | 48.39 | 43.48 |
| Bra027057.1-P | Field mustard | nucleus | 48.19 | 43.3 |
| CDY12937 | Canola | nucleus | 48.19 | 43.3 |
| Bra029491.1-P | Field mustard | nucleus | 42.94 | 43.29 |
| Bra034482.1-P | Field mustard | nucleus | 42.94 | 42.01 |
| Solyc07g051840.2.1 | Tomato | nucleus | 52.82 | 41.52 |
| CDY24892 | Canola | nucleus | 43.75 | 41.41 |
| CDY08634 | Canola | nucleus | 41.53 | 40.95 |
| KRH25355 | Soybean | nucleus | 50.6 | 40.88 |
| KRH22585 | Soybean | nucleus | 50.0 | 40.39 |
| GSMUA_Achr11P... | Banana | nucleus | 33.27 | 39.38 |
| KRH56160 | Soybean | nucleus | 49.6 | 39.17 |
| Zm00001d039245_P001 | Maize | nucleus | 42.34 | 38.82 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 14.52 | 37.5 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 43.35 | 37.39 |
| EES02155 | Sorghum | nucleus | 42.74 | 37.19 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 42.74 | 36.55 |
| GSMUA_Achr7P08850_001 | Banana | nucleus | 27.42 | 35.05 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 43.35 | 34.18 |
| TraesCS3D01G173300.2 | Wheat | plastid | 43.35 | 33.8 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 21.98 | 33.44 |
| GSMUA_Achr10P... | Banana | nucleus | 15.32 | 32.76 |
| GSMUA_Achr10P... | Banana | nucleus | 24.19 | 31.83 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 25.6 | 31.67 |
| GSMUA_Achr11P... | Banana | nucleus | 15.52 | 31.43 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 11.9 | 31.05 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 17.14 | 30.36 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 13.51 | 30.04 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 14.11 | 29.79 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 22.58 | 29.24 |
| GSMUA_Achr10P... | Banana | nucleus | 16.73 | 28.82 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 15.73 | 28.36 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 20.97 | 28.18 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 16.33 | 28.03 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 25.0 | 27.62 |
| GSMUA_Achr10P... | Banana | nucleus | 25.2 | 26.1 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 16.73 | 24.78 |
| Os01t0246700-01 | Rice | nucleus | 18.15 | 21.79 |
| GSMUA_Achr5P09730_001 | Banana | nucleus | 23.19 | 16.15 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | EnsemblPlantsGene:GSMUA_Achr10G15290_001 | EnsemblPlants:GSMUA_Achr10P15290_001 | EnsemblPlants:GSMUA_Achr10T15290_001 | InterPro:IPR003657 |
| InterPro:IPR036576 | UniProt:M0RIF5 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI000296388D | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg |
Description
Putative WRKY transcription factor 6 [Source:GMGC_GENE;Acc:GSMUA_Achr10G15290_001]
Coordinates
chr10:+:23296894..23299071
Molecular Weight (calculated)
53389.8 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.547
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSGHPTVS TGIEFPICLN PRRDVRTMLL AKDEVSNDDR VAVGEVDFFS GEKKNSRSLV ETELDLKVPS LSSIKKEDLT IQTRLHLQTP NTASDRSTVD
101: DGSSKNEDDK EGMNELAAMQ AEVARMKEEN QKLRAVLGQV TTSYNSLHMH LTTLMQQRNQ RETATPQAHE AMVEEKTDAK DRDHGGVLVP RQFMDLGPAA
201: DDEQTSDSST ASPDRSASPP GNAEVGSAEQ SWNPYKAQKL NPTKPADHAQ EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA
301: GCPVRKQVQR CADDRSILIT TYEGTHNHPL PPAAMAMAST TSAAASMLLS GSMSSTDGLM NSNFLARTIL PCSSNMATIS ASAPFPTVTL DLTQNPTNPL
401: QYQRPPAGPF HVPYPGAAPA FSAPSQPPSL PQAQPVMPPS MAETVNAATA AITADPNFTA ALTAAIKSII GGNHQTVNGS NLIINNNNII PDKSCS
101: DGSSKNEDDK EGMNELAAMQ AEVARMKEEN QKLRAVLGQV TTSYNSLHMH LTTLMQQRNQ RETATPQAHE AMVEEKTDAK DRDHGGVLVP RQFMDLGPAA
201: DDEQTSDSST ASPDRSASPP GNAEVGSAEQ SWNPYKAQKL NPTKPADHAQ EATMRKARVS VRARSEAPMI TDGCQWRKYG QKMAKGNPCP RAYYRCTMAA
301: GCPVRKQVQR CADDRSILIT TYEGTHNHPL PPAAMAMAST TSAAASMLLS GSMSSTDGLM NSNFLARTIL PCSSNMATIS ASAPFPTVTL DLTQNPTNPL
401: QYQRPPAGPF HVPYPGAAPA FSAPSQPPSL PQAQPVMPPS MAETVNAATA AITADPNFTA ALTAAIKSII GGNHQTVNGS NLIINNNNII PDKSCS
001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ
Arabidopsis Description
WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.