Factsheet for GSMUA_Achr7P08850_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus	54.9	56.5
GSMUA_Achr7P13400_001	Banana	nucleus	54.9	53.12
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	12.37	49.48
GSMUA_Achr1P05240_001	Banana	nucleus	35.05	41.72
GSMUA_Achr7P19340_001	Banana	nucleus	17.01	34.38
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	30.93	34.29
GSMUA_Achr2P05100_001	Banana	nucleus	16.75	34.21
GSMUA_Achr2P18390_001	Banana	nucleus	32.22	34.06
GSMUA_Achr10P...	Banana	nucleus	19.59	32.76
GSMUA_Achr3P03090_001	Banana	nucleus	32.22	32.72
GSMUA_Achr5P16460_001	Banana	nucleus	18.56	30.64
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	16.75	29.15
GSMUA_Achr11P...	Banana	nucleus	31.44	29.12
GSMUA_Achr5P16750_001	Banana	nucleus	35.05	27.98
GSMUA_Achr11P...	Banana	nucleus	17.53	27.76
GSMUA_Achr10P...	Banana	nucleus	35.05	27.42
GSMUA_Achr3P20290_001	Banana	nucleus	27.06	27.42
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	20.36	27.34
GSMUA_Achr10P...	Banana	nucleus	35.57	27.06
GSMUA_Achr2P15200_001	Banana	nucleus	36.86	26.88
GSMUA_Achr6P05880_001	Banana	nucleus	32.47	26.47
GSMUA_Achr10P...	Banana	nucleus	19.59	26.39
GSMUA_Achr7P05200_001	Banana	nucleus	18.81	26.07
GSMUA_Achr6P13630_001	Banana	nucleus	34.79	25.76
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	32.22	25.61
GSMUA_Achr7P18820_001	Banana	nucleus	29.64	25.61
GSMUA_Achr3P13440_001	Banana	nucleus	18.04	25.45
GSMUA_Achr10P...	Banana	nucleus	31.19	25.26
GSMUA_Achr6P02330_001	Banana	nucleus	23.71	24.93
GSMUA_Achr1P10080_001	Banana	nucleus	20.1	23.28
GSMUA_Achr5P09730_001	Banana	nucleus	35.31	19.24

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G08850_001	EnsemblPlants:GSMUA_Achr7P08850_001	EnsemblPlants:GSMUA_Achr7T08850_001	InterPro:IPR003657	InterPro:IPR036576
UniProt:M0TFX3	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0002954089	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:

Description

Putative Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr7G08850_001]

Coordinates

chr7:+:7215190..7217283

Molecular Weight (calculated)

41743.9 Da

IEP (calculated)

8.000

GRAVY (calculated)

-0.546

Length

388 amino acids

Sequence
(BLAST)

001: MGEVREENQR LKMILAQIVK DYQYLQKQYF DILQQEQSKK ALETAEPDGS TISPDNSSDD PKEEEPGEPW PPSKILKNPR NGDDEGSQQP QVKKARVSVR
101: ARCDAPTMND GCQWRKYGQK VAKGNPCPRA YYRCTVAPGC PVRKQVQRCA EDMSILITTY EGTHNHPLPL SATTMACTTA AAASMLMTGS TSLHGLNFGM
201: LGSSNARQPY LPIPSISSTP SYPTITLDLT APPSATSQLN QFTRFPRQSQ DSFYHSILQK AINSVAATTT TAVPSPSPNQ HALTDTIAKA ITSDPSFQSA
301: IAAAITSYVG GQPGREGASH DLLKLGGHFN SSAVAQLSAA VNGCASSYLN RSSSSSSSHQ PNLPLLQPPL AFPTPKTASA DRNSESID

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.