Factsheet for GSMUA_Achr10P06050_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P10080_001
GSMUA_Achr1P16990_001
GSMUA_Achr2P05100_001
GSMUA_Achr2P08200_001
GSMUA_Achr3P13440_001
GSMUA_Achr3P22420_001
GSMUA_Achr3P28040_001
GSMUA_Achr4P01930_001
GSMUA_Achr4P05970_001
GSMUA_Achr4P05990_001
GSMUA_Achr4P06000_001
GSMUA_Achr4P12750_001
GSMUA_Achr5P16460_001
GSMUA_Achr6P22990_001
GSMUA_Achr7P05200_001
GSMUA_Achr7P16090_001
GSMUA_Achr7P19340_001
GSMUA_Achr8P08040_001
GSMUA_Achr9P22750_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	18776063
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT1G80840.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT2G25000.1	21798944
AT2G25000.1	GSMUA_Achr6P22990_001	AT3G27420.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944
AT2G25000.1	GSMUA_Achr11P...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr1P16990_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr2P08200_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P22420_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr8P08040_001	AT5G52650.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G52650.1	21798944
AT2G25000.1	GSMUA_Achr3P28040_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05970_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P05990_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P06000_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr4P12750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_Achr9P22750_001	AT5G57870.1	21798944
AT2G25000.1	GSMUA_AchrUn_...	AT5G57870.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G71230.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	18776063
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT1G80840.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT2G25000.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	16603654
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr10P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr11P...	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr1P10080_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr2P05100_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr3P13440_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr4P01930_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr5P16460_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P05200_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P16090_001	AT4G31800.1	21798944
AT4G31800.1	GSMUA_Achr7P19340_001	AT4G31800.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	nucleus	55.9	65.71
GSMUA_Achr2P05100_001	Banana	nucleus	42.71	64.74
GSMUA_Achr7P19340_001	Banana	nucleus	36.11	54.17
GSMUA_Achr3P13440_001	Banana	nucleus	50.0	52.36
GSMUA_Achr7P05200_001	Banana	nucleus	50.69	52.14
GSMUA_Achr1P10080_001	Banana	nucleus	58.68	50.45
GSMUA_Achr10P...	Banana	nucleus	38.54	47.84
GSMUA_Achr5P16460_001	Banana	nucleus	37.85	46.38
Bra019123.1-P	Field mustard	nucleus	30.9	45.88
PGSC0003DMT400073710	Potato	nucleus	33.68	44.7
Solyc12g042590.1.1	Tomato	nucleus	32.64	43.52
KRH61669	Soybean	nucleus	32.64	42.73
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	32.99	42.6
VIT_09s0018g00240.t01	Wine grape	nucleus	45.83	42.44
CDX72327	Canola	nucleus	40.62	41.05
KRH15674	Soybean	nucleus	39.93	40.78
KRH47344	Soybean	nucleus	43.75	40.51
KRH23643	Soybean	nucleus	43.06	40.13
PGSC0003DMT400019058	Potato	nucleus	36.11	39.85
KRH44560	Soybean	nucleus	43.06	39.62
PGSC0003DMT400019061	Potato	nucleus	34.72	39.53
Solyc08g067340.2.1	Tomato	nucleus	34.72	39.53
CDY22299	Canola	nucleus	39.24	38.97
CDY67287	Canola	nucleus	39.24	38.97
Bra008435.1-P	Field mustard	nucleus	39.24	38.97
CDX75196	Canola	nucleus	38.19	38.87
Solyc08g067360.2.1	Tomato	nucleus	34.72	38.76
VIT_04s0008g05760.t01	Wine grape	nucleus	42.36	38.49
AT2G25000.1	Thale cress	nucleus	36.11	38.38
CDY39879	Canola	nucleus	40.62	38.11
AT4G31800.1	Thale cress	nucleus	40.62	37.74
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	37.85	37.72
Bra010220.1-P	Field mustard	nucleus	40.28	37.66
KRH09652	Soybean	nucleus	43.06	37.58
CDX88573	Canola	nucleus	38.89	37.21
AT1G80840.1	Thale cress	nucleus	38.89	37.09
Bra003588.1-P	Field mustard	nucleus	38.19	37.04
CDX67971	Canola	nucleus	38.19	37.04
CDX87347	Canola	nucleus	38.54	37.0
Bra035148.1-P	Field mustard	nucleus	38.54	37.0
CDX79347	Canola	nucleus	38.19	36.91
KRH05350	Soybean	nucleus	39.93	36.86
Bra011299.1-P	Field mustard	nucleus	39.93	36.28
CDX68787	Canola	nucleus	39.93	36.05
Solyc03g116890.2.1	Tomato	nucleus	42.36	34.86
PGSC0003DMT400051047	Potato	nucleus	42.36	34.37
PGSC0003DMT400073396	Potato	nucleus	42.71	34.17
KRH52329	Soybean	nucleus	36.46	33.98
Solyc06g068460.2.1	Tomato	nucleus	42.36	33.89
Bra023983.1-P	Field mustard	nucleus	39.58	33.04
CDY70096	Canola	nucleus	39.58	33.04
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	10.76	31.96
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	27.43	22.57
GSMUA_Achr3P03090_001	Banana	nucleus	27.08	20.42
GSMUA_Achr11P...	Banana	nucleus	29.17	20.05
GSMUA_Achr10P...	Banana	nucleus	26.04	19.89
GSMUA_Achr7P08850_001	Banana	nucleus	26.39	19.59
GSMUA_Achr2P18390_001	Banana	nucleus	23.26	18.26
GSMUA_Achr1P05240_001	Banana	nucleus	20.49	18.1
GSMUA_Achr7P13400_001	Banana	nucleus	25.0	17.96
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	29.51	17.42
GSMUA_Achr3P20290_001	Banana	nucleus	22.92	17.23
GSMUA_Achr7P18820_001	Banana	nucleus	26.39	16.93
GSMUA_Achr10P...	Banana	nucleus	28.82	16.73
GSMUA_Achr5P16750_001	Banana	nucleus	28.12	16.67
GSMUA_Achr6P05880_001	Banana	nucleus	27.08	16.39
GSMUA_Achr10P...	Banana	nucleus	28.12	15.88
GSMUA_Achr6P13630_001	Banana	nucleus	28.82	15.84
GSMUA_Achr6P02330_001	Banana	nucleus	20.14	15.72
GSMUA_Achr2P15200_001	Banana	nucleus	28.82	15.6
GSMUA_Achr10P...	Banana	nucleus	25.69	15.45
GSMUA_Achr5P09730_001	Banana	nucleus	19.44	7.87

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr10G06050_001	EnsemblPlants:GSMUA_Achr10P06050_001	EnsemblPlants:GSMUA_Achr10T06050_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0RFT2	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF3
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000296346E	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 40 [Source:GMGC_GENE;Acc:GSMUA_Achr10G06050_001]

Coordinates

chr10:-:16529877..16531080

Molecular Weight (calculated)

31100.5 Da

IEP (calculated)

9.395

GRAVY (calculated)

-0.677

Length

288 amino acids

Sequence
(BLAST)

001: MDLAAWLNAP SLDLGLHVGD GKLSVEEDDG KEVRALEAEL DRVTQENKRL KEKLAAMAAS YGTLRSQMAD LISKASSEGA SVSPGTKRNR HTLDSFSPAP
101: APVPAAAASL GTNCIRNEAE STSSEDSFKR VKEENKPKVS KLHVRTDPSD SSLIVKDGYQ WRKYGQKITR DNPCPRAYFR CSFAPACPVK KKVQRSAEDP
201: SLLVATYEGE HNHGRAPHPR AQQASGRSSS VTSQSPAPST RRPQEAESPD LHAGLVEQMA ATLTNDPVFK ATLAAAISGR MLRSSPPK

Best Arabidopsis Sequence Match ( AT1G80840.1 )
(BLAST)

001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK

Arabidopsis Description

WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.