Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX72327 | Canola | nucleus | 74.84 | 81.4 |
| Bra011299.1-P | Field mustard | nucleus | 81.94 | 80.13 |
| CDX68787 | Canola | nucleus | 81.94 | 79.62 |
| CDX75196 | Canola | nucleus | 72.26 | 79.15 |
| Bra019123.1-P | Field mustard | nucleus | 47.42 | 75.77 |
| AT2G25000.1 | Thale cress | nucleus | 60.0 | 68.63 |
| Bra023983.1-P | Field mustard | nucleus | 73.87 | 66.38 |
| CDY70096 | Canola | nucleus | 73.55 | 66.09 |
| GSMUA_Achr7P19340_001 | Banana | nucleus | 32.9 | 53.12 |
| PGSC0003DMT400019058 | Potato | nucleus | 40.32 | 47.89 |
| GSMUA_Achr2P05100_001 | Banana | nucleus | 28.71 | 46.84 |
| PGSC0003DMT400019061 | Potato | nucleus | 38.06 | 46.64 |
| Solyc08g067360.2.1 | Tomato | nucleus | 38.71 | 46.51 |
| KRH61669 | Soybean | nucleus | 32.9 | 46.36 |
| Solyc08g067340.2.1 | Tomato | nucleus | 37.74 | 46.25 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 46.77 | 45.74 |
| GSMUA_Achr10P... | Banana | nucleus | 34.19 | 45.69 |
| KRH15674 | Soybean | nucleus | 41.29 | 45.39 |
| GSMUA_Achr5P16460_001 | Banana | nucleus | 33.87 | 44.68 |
| GSMUA_Achr11P... | Banana | nucleus | 34.52 | 43.67 |
| AT1G80840.1 | Thale cress | nucleus | 41.94 | 43.05 |
| GSMUA_Achr3P13440_001 | Banana | nucleus | 37.42 | 42.18 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 38.06 | 42.14 |
| HORVU5Hr1G065380.2 | Barley | nucleus | 23.23 | 41.38 |
| GSMUA_Achr10P... | Banana | nucleus | 37.74 | 40.62 |
| KRH05350 | Soybean | nucleus | 40.65 | 40.38 |
| GSMUA_Achr7P16090_001 | Banana | endoplasmic reticulum, nucleus, plastid | 28.06 | 39.01 |
| GSMUA_Achr4P01930_001 | Banana | extracellular, golgi | 34.52 | 37.02 |
| KRH52329 | Soybean | nucleus | 36.45 | 36.57 |
| Os02t0181300-01 | Rice | nucleus | 39.35 | 35.06 |
| GSMUA_Achr1P10080_001 | Banana | nucleus | 37.42 | 34.63 |
| Zm00001d053746_P001 | Maize | nucleus | 35.81 | 34.58 |
| Os06t0649000-01 | Rice | nucleus | 37.1 | 34.12 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 38.39 | 34.0 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 38.06 | 33.91 |
| Zm00001d020492_P001 | Maize | nucleus | 32.9 | 33.77 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 35.48 | 33.64 |
| TraesCS7B01G418500.2 | Wheat | nucleus | 35.48 | 33.43 |
| Os09t0417600-02 | Rice | nucleus | 35.16 | 33.33 |
| TraesCS5B01G224000.1 | Wheat | nucleus | 35.48 | 33.23 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 29.03 | 33.21 |
| Zm00001d015515_P001 | Maize | nucleus | 37.1 | 33.14 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 34.84 | 33.13 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 34.52 | 33.02 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 35.16 | 32.93 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 37.42 | 32.86 |
| EER98905 | Sorghum | nucleus, plastid | 34.52 | 32.72 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 34.52 | 32.72 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 33.55 | 32.6 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 34.19 | 32.52 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 28.39 | 32.47 |
| EER90124 | Sorghum | nucleus | 35.81 | 32.46 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 37.1 | 32.39 |
| Zm00001d020495_P001 | Maize | nucleus | 27.74 | 32.33 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 34.19 | 32.32 |
| TraesCS7B01G419400.1 | Wheat | nucleus | 33.55 | 32.3 |
| TraesCS7B01G418600.1 | Wheat | nucleus | 30.0 | 32.18 |
| EES04642 | Sorghum | nucleus | 37.74 | 32.14 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 34.19 | 32.02 |
| Zm00001d046805_P001 | Maize | nucleus | 36.13 | 31.91 |
| EER88729 | Sorghum | nucleus | 35.81 | 31.9 |
| Zm00001d036726_P001 | Maize | nucleus | 35.16 | 31.69 |
| KXG35639 | Sorghum | nucleus | 30.0 | 31.53 |
| TraesCS5B01G224100.1 | Wheat | nucleus | 32.9 | 30.91 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 33.87 | 30.17 |
| Os09t0417800-01 | Rice | nucleus | 30.0 | 29.25 |
| TraesCS7D01G497300.1 | Wheat | plastid | 34.52 | 28.76 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 33.87 | 28.3 |
| Zm00001d005749_P001 | Maize | nucleus | 30.97 | 27.35 |
| HORVU7Hr1G113850.4 | Barley | nucleus, plastid | 35.16 | 26.85 |
| HORVU5Hr1G065420.15 | Barley | nucleus | 33.55 | 26.6 |
| AT1G69810.1 | Thale cress | nucleus | 22.9 | 18.35 |
| AT4G01720.1 | Thale cress | nucleus | 27.74 | 17.59 |
| AT1G68150.1 | Thale cress | nucleus | 20.97 | 17.38 |
| AT1G62300.1 | Thale cress | nucleus | 30.97 | 17.36 |
| AT4G22070.1 | Thale cress | nucleus | 29.03 | 16.73 |
| AT4G04450.1 | Thale cress | nucleus | 27.42 | 16.1 |
| AT5G15130.1 | Thale cress | nucleus | 27.1 | 15.33 |
| AT1G18860.1 | Thale cress | nucleus | 25.81 | 15.15 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:829308 | ProteinID:AEE85960.1 | EMBL:AF224698 | EMBL:AF428421 |
| EMBL:AK227401 | ArrayExpress:AT4G31800 | EnsemblPlantsGene:AT4G31800 | RefSeq:AT4G31800 | TAIR:AT4G31800 | RefSeq:AT4G31800-TAIR-G |
| EnsemblPlants:AT4G31800.1 | TAIR:AT4G31800.1 | EMBL:AY088048 | EMBL:AY125557 | ProteinID:CAA19743.1 | ProteinID:CAB79898.1 |
| ncoils:Coil | GO:GO:0002237 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009719 | GO:GO:0009751 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0031347 | GO:GO:0042742 | GO:GO:0042802 | GO:GO:0043565 | GO:GO:0050832 |
| InterPro:IPR003657 | InterPro:IPR036576 | RefSeq:NP_567882.1 | PFAM:PF03106 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0005417 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025034 |
| PO:PO:0025281 | PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF32 | UniProt:Q0WTZ3 | UniProt:Q9C5T4 |
| SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000014DA | Symbol:WRKY18 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
Coordinates
chr4:+:15382777..15385100
Molecular Weight (calculated)
34767.6 Da
IEP (calculated)
7.377
GRAVY (calculated)
-0.842
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.