Factsheet for AT4G01720.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22006	Canola	nucleus	84.25	84.08
Bra036315.1-P	Field mustard	nucleus	84.25	84.08
CDY07121	Canola	nucleus	83.84	82.83
KRH19450	Soybean	nucleus	28.22	36.03
KRH02502	Soybean	nucleus	27.61	34.53
AT4G04450.1	Thale cress	nucleus	35.99	33.33
AT4G22070.1	Thale cress	nucleus	36.2	32.9
KRH37650	Soybean	nucleus	28.63	30.57
KRH12664	Soybean	nucleus	28.02	30.38
AT1G62300.1	Thale cress	nucleus	33.54	29.66
AT1G69810.1	Thale cress	nucleus	23.31	29.46
AT1G80840.1	Thale cress	nucleus	17.38	28.15
AT4G31800.1	Thale cress	nucleus	17.59	27.74
AT1G68150.1	Thale cress	nucleus	20.65	27.01
AT1G18860.1	Thale cress	nucleus	29.04	26.89
AT2G25000.1	Thale cress	nucleus	14.72	26.57
AT5G15130.1	Thale cress	nucleus	29.45	26.28

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:828001	ProteinID:AAC72869.1	ProteinID:AEE82069.1	EMBL:AF480165
EMBL:AK229522	ArrayExpress:AT4G01720	EnsemblPlantsGene:AT4G01720	RefSeq:AT4G01720	TAIR:AT4G01720	RefSeq:AT4G01720-TAIR-G
EnsemblPlants:AT4G01720.1	TAIR:AT4G01720.1	Unigene:At.27833	EMBL:BT008704	EMBL:BT029024	ProteinID:CAB77742.1
ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	RefSeq:NP_192081.1	PFAM:PF03106	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001185	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF30	UniProt:Q0WNC3	UniProt:Q9ZSI7	SMART:SM00774
SUPFAM:SSF118290	UniParc:UPI0000138F83	Symbol:WRKY47	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

WRKY47Probable WRKY transcription factor 47 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZSI7]

Coordinates

chr4:+:744804..748554

Molecular Weight (calculated)

53710.1 Da

IEP (calculated)

7.009

GRAVY (calculated)

-0.831

Length

489 amino acids

Sequence
(BLAST)

001: MEEHIQDRRE IAFLHSGEFL HGDSDSKDHQ PNESPVERHH ESSIKEVDFF AAKSQPFDLG HVRTTTIVGS SGFNDGLGLV NSCHGTSSND GDDKTKTQIS
101: RLKLELERLH EENHKLKHLL DEVSESYNDL QRRVLLARQT QVEGLHHKQH EDVPQAGSSQ ALENRRPKDM NHETPATTLK RRSPDDVDGR DMHRGSPKTP
201: RIDQNKSTNH EEQQNPHDQL PYRKARVSVR ARSDATTVND GCQWRKYGQK MAKGNPCPRA YYRCTMAVGC PVRKQVQRCA EDTTILTTTY EGNHNHPLPP
301: SATAMAATTS AAAAMLLSGS SSSNLHQTLS SPSATSSSSF YHNFPYTSTI ATLSASAPFP TITLDLTNPP RPLQPPPQFL SQYGPAAFLP NANQIRSMNN
401: NNQQLLIPNL FGPQAPPREM VDSVRAAIAM DPNFTAALAA AISNIIGGGN NDNNNNTDIN DNKVDAKSGG SSNGDSPQLP QSCTTFSTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.