Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78611 | Canola | nucleus | 82.66 | 85.96 |
| Bra006283.1-P | Field mustard | nucleus | 82.66 | 85.96 |
| CDX70593 | Canola | nucleus | 81.93 | 85.36 |
| Bra023505.1-P | Field mustard | nucleus | 79.2 | 84.11 |
| CDX69548 | Canola | nucleus | 66.06 | 83.8 |
| CDY63770 | Canola | nucleus | 78.28 | 83.46 |
| Bra008719.1-P | Field mustard | nucleus | 83.76 | 83.3 |
| CDX69549 | Canola | nucleus | 83.76 | 83.3 |
| CDX85052 | Canola | nucleus | 83.39 | 83.09 |
| CDX85563 | Canola | nucleus | 40.51 | 71.61 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 41.06 | 44.82 |
| Zm00001d045375_P001 | Maize | nucleus | 20.44 | 44.8 |
| Solyc02g067430.2.1 | Tomato | nucleus | 35.04 | 43.64 |
| PGSC0003DMT400017859 | Potato | nucleus | 34.49 | 42.66 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 25.18 | 42.33 |
| KRG93506 | Soybean | nucleus | 36.86 | 41.22 |
| KRH01137 | Soybean | nucleus | 39.05 | 39.56 |
| KRH40121 | Soybean | nucleus | 38.69 | 39.19 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 31.57 | 35.31 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 31.57 | 35.16 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 38.14 | 34.55 |
| AT1G18860.1 | Thale cress | nucleus | 33.03 | 34.28 |
| Os06t0146250-00 | Rice | nucleus | 37.77 | 34.27 |
| Os01t0185900-01 | Rice | nucleus | 31.39 | 33.92 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 37.41 | 33.88 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 31.75 | 33.08 |
| AT1G69810.1 | Thale cress | nucleus | 23.36 | 33.07 |
| OQU75809 | Sorghum | nucleus | 37.41 | 32.8 |
| Zm00001d008794_P001 | Maize | nucleus | 31.02 | 31.48 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 33.94 | 30.74 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 32.48 | 30.12 |
| EES02331 | Sorghum | nucleus | 30.11 | 30.11 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 33.39 | 30.05 |
| Zm00001d039532_P001 | Maize | nucleus | 29.56 | 29.62 |
| AT4G01720.1 | Thale cress | nucleus | 26.28 | 29.45 |
| AT1G68150.1 | Thale cress | nucleus | 19.34 | 28.34 |
| AT4G31800.1 | Thale cress | nucleus | 15.33 | 27.1 |
| AT2G25000.1 | Thale cress | nucleus | 13.14 | 26.57 |
| AT1G80840.1 | Thale cress | nucleus | 14.6 | 26.49 |
| AT4G22070.1 | Thale cress | nucleus | 24.82 | 25.28 |
| AT4G04450.1 | Thale cress | nucleus | 24.09 | 25.0 |
| AT1G62300.1 | Thale cress | nucleus | 23.54 | 23.33 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | EntrezGene:831365 | ProteinID:AED92120.1 | EMBL:AK117448 | ProteinID:ANM69621.1 |
| ArrayExpress:AT5G15130 | EnsemblPlantsGene:AT5G15130 | RefSeq:AT5G15130 | TAIR:AT5G15130 | RefSeq:AT5G15130-TAIR-G | EnsemblPlants:AT5G15130.1 |
| TAIR:AT5G15130.1 | Unigene:At.27570 | ProteinID:CAB89323.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 |
| InterPro:IPR036576 | RefSeq:NP_001331284.1 | RefSeq:NP_197017.1 | PFAM:PF03106 | PO:PO:0009005 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | UniProt:Q9LXG8 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI00000A9101 |
| Symbol:WRKY72 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
Coordinates
chr5:+:4904290..4907094
Molecular Weight (calculated)
59010.2 Da
IEP (calculated)
7.080
GRAVY (calculated)
-0.678
Length
548 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.