Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006283.1-P | Field mustard | nucleus | 99.24 | 99.24 |
| CDX70593 | Canola | nucleus | 96.77 | 96.96 |
| AT5G15130.1 | Thale cress | nucleus | 85.96 | 82.66 |
| CDX86714 | Canola | nucleus | 13.28 | 82.35 |
| CDX69549 | Canola | nucleus | 85.77 | 82.03 |
| CDY63770 | Canola | nucleus | 79.7 | 81.71 |
| CDX85052 | Canola | nucleus | 85.01 | 81.45 |
| CDX69548 | Canola | nucleus | 66.6 | 81.25 |
| CDX85563 | Canola | nucleus | 39.85 | 67.74 |
| CDY28692 | Canola | nucleus | 60.72 | 59.48 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 42.69 | 44.82 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 26.76 | 43.25 |
| Solyc02g067430.2.1 | Tomato | nucleus | 35.48 | 42.5 |
| PGSC0003DMT400017859 | Potato | nucleus | 35.29 | 41.99 |
| KRG93506 | Soybean | nucleus | 37.95 | 40.82 |
| Zm00001d045375_P001 | Maize | nucleus | 19.35 | 40.8 |
| CDY26717 | Canola | nucleus | 22.2 | 40.77 |
| KRH01137 | Soybean | nucleus | 40.04 | 39.0 |
| KRH40121 | Soybean | nucleus | 39.47 | 38.45 |
| CDX97845 | Canola | nucleus | 17.08 | 37.34 |
| CDX81900 | Canola | nucleus | 34.54 | 35.07 |
| CDY11652 | Canola | nucleus | 25.43 | 34.99 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 32.26 | 34.69 |
| CDY68857 | Canola | nucleus | 24.29 | 34.59 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 32.26 | 34.55 |
| CDY21693 | Canola | nucleus | 33.97 | 34.49 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 39.47 | 34.38 |
| CDX83804 | Canola | nucleus | 33.59 | 34.37 |
| CDX96692 | Canola | nucleus | 33.59 | 34.24 |
| CDX81493 | Canola | nucleus | 20.11 | 34.19 |
| Os01t0185900-01 | Rice | nucleus | 32.83 | 34.12 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 38.9 | 33.88 |
| Os06t0146250-00 | Rice | nucleus | 38.33 | 33.44 |
| CDY56082 | Canola | nucleus | 24.1 | 33.16 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 32.64 | 32.7 |
| OQU75809 | Sorghum | nucleus | 38.14 | 32.16 |
| Zm00001d008794_P001 | Maize | nucleus | 32.45 | 31.67 |
| CDY01891 | Canola | nucleus | 19.54 | 31.4 |
| CDX96044 | Canola | nucleus | 19.35 | 31.1 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 35.48 | 30.91 |
| Zm00001d039532_P001 | Maize | nucleus | 31.5 | 30.35 |
| EES02331 | Sorghum | nucleus | 31.5 | 30.29 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 33.97 | 30.29 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 34.72 | 30.05 |
| CDX72327 | Canola | nucleus | 15.94 | 29.47 |
| CDY22006 | Canola | nucleus | 26.95 | 28.98 |
| CDY07121 | Canola | nucleus | 26.95 | 28.69 |
| CDX75196 | Canola | nucleus | 15.18 | 28.27 |
| CDX94553 | Canola | nucleus | 25.43 | 27.29 |
| CDY16669 | Canola | nucleus | 25.43 | 27.24 |
| CDY39879 | Canola | nucleus | 15.75 | 27.04 |
| CDY67287 | Canola | nucleus | 14.8 | 26.9 |
| CDY22299 | Canola | nucleus | 14.8 | 26.9 |
| CDY19255 | Canola | nucleus | 11.95 | 26.47 |
| CDX68787 | Canola | nucleus | 15.75 | 26.02 |
| CDX67971 | Canola | nucleus | 14.42 | 25.59 |
| CDX88573 | Canola | nucleus | 14.61 | 25.58 |
| CDX82900 | Canola | nucleus | 25.24 | 25.53 |
| CDX79347 | Canola | nucleus | 14.42 | 25.5 |
| CDX90863 | Canola | nucleus | 24.48 | 25.44 |
| CDY21301 | Canola | nucleus | 24.48 | 25.44 |
| CDX87347 | Canola | nucleus | 14.42 | 25.33 |
| CDY12937 | Canola | nucleus | 25.81 | 24.64 |
| CDY70096 | Canola | nucleus | 15.94 | 24.35 |
| CDY19535 | Canola | nucleus | 25.43 | 24.28 |
| CDY24892 | Canola | nucleus | 23.53 | 23.66 |
| CDY72612 | Canola | nucleus | 10.63 | 23.24 |
| CDY08634 | Canola | nucleus | 21.63 | 22.66 |
| CDX86713 | Canola | nucleus | 3.98 | 17.8 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078CN64 | EnsemblPlants:CDX78611 | ProteinID:CDX78611 | ProteinID:CDX78611.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00130025001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF1A0E | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA03g05230D
Coordinates
chrLK031815:+:1525417..1527692
Molecular Weight (calculated)
56842.8 Da
IEP (calculated)
6.623
GRAVY (calculated)
-0.609
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVLLKLPTS DSLLKDKFLG SAQILEASKG DDDHQELESA KAEMTEVKEE NEKLKGMLER IESDYKSLKL RFFDIVQQEP SNNPTQDQNM VGLQKSTTDL
101: SSFDQEHELV SLSLGKRSSS PSDNTSKKED KEVNADEELT KAGLTLGFSN RSLSSQENSS GETWPSGKVT GKRSSPAPAS CGDVEGEAGQ QNNVKRARVC
201: VRARCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CADDMSILIT TYEGTHSHPL PLSATTMAST TSAAASMLLS GSSSSSSSAA
301: EMIGNNLYDN SRFINNNKSF YSPTLHSPLH PTVTLDLTTP QHSSSSSLPS LNFNKYSNSF QNFPSTSLNF SSNPSLSSST TLSIPAVWGS GYSSYTPYPY
401: NNVQFGTSNL GKTVQNSQSL TETLTKALTS DPSFQTVIAA AISSMVGSNG EKQIVNPISN NVQQTATTNN IKGCGGYFSS LLMSNIIANN QTGASLDQPP
501: SQPPLSMFKN SSSSSSTTSF VNKEEKS
101: SSFDQEHELV SLSLGKRSSS PSDNTSKKED KEVNADEELT KAGLTLGFSN RSLSSQENSS GETWPSGKVT GKRSSPAPAS CGDVEGEAGQ QNNVKRARVC
201: VRARCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP GCPVRKQVQR CADDMSILIT TYEGTHSHPL PLSATTMAST TSAAASMLLS GSSSSSSSAA
301: EMIGNNLYDN SRFINNNKSF YSPTLHSPLH PTVTLDLTTP QHSSSSSLPS LNFNKYSNSF QNFPSTSLNF SSNPSLSSST TLSIPAVWGS GYSSYTPYPY
401: NNVQFGTSNL GKTVQNSQSL TETLTKALTS DPSFQTVIAA AISSMVGSNG EKQIVNPISN NVQQTATTNN IKGCGGYFSS LLMSNIIANN QTGASLDQPP
501: SQPPLSMFKN SSSSSSTTSF VNKEEKS
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.