Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96044 | Canola | nucleus | 85.81 | 81.1 |
| CDY01891 | Canola | nucleus | 84.19 | 79.57 |
| CDX86714 | Canola | nucleus | 20.32 | 74.12 |
| AT1G68150.1 | Thale cress | nucleus | 77.1 | 63.9 |
| PGSC0003DMT400076591 | Potato | nucleus | 47.1 | 35.35 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 42.9 | 34.73 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 40.97 | 34.42 |
| Solyc01g104550.2.1 | Tomato | nucleus | 51.29 | 33.47 |
| VIT_12s0055g00340.t01 | Wine grape | nucleus | 50.65 | 32.24 |
| CDX97845 | Canola | nucleus | 24.19 | 31.12 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 43.55 | 30.07 |
| KRH58361 | Soybean | nucleus | 44.84 | 28.66 |
| GSMUA_Achr10P... | Banana | nucleus | 42.58 | 27.56 |
| TraesCS6D01G306300.1 | Wheat | nucleus | 44.84 | 24.87 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 44.19 | 24.77 |
| CDY11652 | Canola | nucleus | 30.32 | 24.54 |
| TraesCS6B01G357600.1 | Wheat | nucleus | 44.19 | 24.46 |
| CDX85563 | Canola | nucleus | 24.19 | 24.19 |
| EES05866 | Sorghum | nucleus | 44.52 | 23.88 |
| CDY68857 | Canola | nucleus | 28.39 | 23.78 |
| CDY26717 | Canola | nucleus | 21.61 | 23.34 |
| Zm00001d018203_P001 | Maize | nucleus | 43.55 | 23.32 |
| CDY56082 | Canola | nucleus | 27.74 | 22.45 |
| HORVU6Hr1G079710.2 | Barley | nucleus | 44.52 | 22.26 |
| Os02t0770500-00 | Rice | nucleus | 45.16 | 21.57 |
| CDX69548 | Canola | nucleus | 29.03 | 20.83 |
| CDX72327 | Canola | nucleus | 19.03 | 20.7 |
| CDX75196 | Canola | nucleus | 18.71 | 20.49 |
| CDY63770 | Canola | nucleus | 33.87 | 20.43 |
| CDX70593 | Canola | nucleus | 34.19 | 20.15 |
| CDX78611 | Canola | nucleus | 34.19 | 20.11 |
| CDX81900 | Canola | nucleus | 33.55 | 20.04 |
| CDY21693 | Canola | nucleus | 33.55 | 20.04 |
| CDX83804 | Canola | nucleus | 33.23 | 20.0 |
| CDX96692 | Canola | nucleus | 33.23 | 19.92 |
| CDY16669 | Canola | nucleus | 31.61 | 19.92 |
| CDY22006 | Canola | nucleus | 31.29 | 19.8 |
| CDX94553 | Canola | nucleus | 31.29 | 19.76 |
| CDY24892 | Canola | nucleus | 33.23 | 19.66 |
| CDX85052 | Canola | nucleus | 34.84 | 19.64 |
| CDX69549 | Canola | nucleus | 34.84 | 19.6 |
| CDY07121 | Canola | nucleus | 31.29 | 19.6 |
| CDY28692 | Canola | nucleus | 33.87 | 19.52 |
| CDX82900 | Canola | nucleus | 32.58 | 19.39 |
| CDY21301 | Canola | nucleus | 31.61 | 19.33 |
| CDX90863 | Canola | nucleus | 31.61 | 19.33 |
| CDY39879 | Canola | nucleus | 19.03 | 19.22 |
| CDY19535 | Canola | nucleus | 33.55 | 18.84 |
| CDY12937 | Canola | nucleus | 33.55 | 18.84 |
| CDX68787 | Canola | nucleus | 19.03 | 18.5 |
| CDY67287 | Canola | nucleus | 17.1 | 18.28 |
| CDY22299 | Canola | nucleus | 17.1 | 18.28 |
| CDX79347 | Canola | nucleus | 17.1 | 17.79 |
| CDX67971 | Canola | nucleus | 16.45 | 17.17 |
| CDY08634 | Canola | nucleus | 27.74 | 17.1 |
| CDX88573 | Canola | nucleus | 16.45 | 16.94 |
| CDY70096 | Canola | nucleus | 18.71 | 16.81 |
| CDX87347 | Canola | nucleus | 16.13 | 16.67 |
| CDY72612 | Canola | nucleus | 8.71 | 11.2 |
| CDY19255 | Canola | nucleus | 8.39 | 10.92 |
| CDX86713 | Canola | nucleus | 0.32 | 0.85 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078D2E8 | EnsemblPlants:CDX81493 | ProteinID:CDX81493 | ProteinID:CDX81493.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00135110001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDF3D4 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC02g17970D
Coordinates
chrLK031825:+:263245..264680
Molecular Weight (calculated)
35573.8 Da
IEP (calculated)
5.542
GRAVY (calculated)
-0.977
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MGMDLSLKLE KEKDEERSTH ICEREDEEKE DASEDKDEKM VKEDEIEDSC LRSKTREEEK ECEELLQMQI EMEHVKEENT RLRKLVEQTL QDYRQLEMKF
101: PVIDQTNKMD LETFLGAQAK DRKRGVERYD SLNLVDGELG LSLSLQKKQK QDKYSQRVVT SSPGNRKARV SVRARCDTPT MNDGCQWRKY GQKTAKGNPC
201: PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI TTYEGTHNHP LPVGATAMAS TASASPFLLL DSSDNLSHPS YLQQNGSNNQ SLRSLINFDD SSFRGGDHVS
301: SSQNRLNWMM
101: PVIDQTNKMD LETFLGAQAK DRKRGVERYD SLNLVDGELG LSLSLQKKQK QDKYSQRVVT SSPGNRKARV SVRARCDTPT MNDGCQWRKY GQKTAKGNPC
201: PRAYYRCTVA PGCPVRKQVQ RCLEDMSILI TTYEGTHNHP LPVGATAMAS TASASPFLLL DSSDNLSHPS YLQQNGSNNQ SLRSLINFDD SSFRGGDHVS
301: SSQNRLNWMM
001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
Arabidopsis Description
WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.