Factsheet for TraesCS6B01G357600.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G306300.1	Wheat	nucleus	94.46	94.63
TraesCS6A01G326500.2	Wheat	nucleus	93.04	94.21
HORVU6Hr1G079710.2	Barley	nucleus	91.61	82.74
EES05866	Sorghum	nucleus	62.5	60.55
Zm00001d018203_P001	Maize	nucleus	59.64	57.69
Os02t0770500-00	Rice	nucleus	64.64	55.78
GSMUA_Achr3P20290_001	Banana	nucleus	32.86	48.04
GSMUA_Achr7P18820_001	Banana	nucleus	35.89	44.77
CDX81493	Canola	nucleus	24.46	44.19
GSMUA_Achr10P...	Banana	nucleus	37.32	43.63
GSMUA_Achr6P02330_001	Banana	nucleus	27.68	42.01
KRH42243	Soybean	nucleus	13.04	40.33
CDX96044	Canola	nucleus	23.57	40.24
Bra004285.1-P	Field mustard	nucleus	23.39	39.94
CDY01891	Canola	nucleus	23.39	39.94
AT1G68150.1	Thale cress	nucleus	25.0	37.43
PGSC0003DMT400076591	Potato	nucleus	27.32	37.05
Solyc01g104550.2.1	Tomato	nucleus	29.82	35.16
VIT_12s0055g00340.t01	Wine grape	nucleus	30.36	34.91
KRH58361	Soybean	nucleus	28.57	32.99
TraesCS3B01G130000.1	Wheat	nucleus	23.39	26.73
TraesCS3B01G199000.2	Wheat	nucleus	23.21	22.41
TraesCS7B01G418600.1	Wheat	nucleus	11.43	22.15
TraesCS7B01G418500.2	Wheat	nucleus	12.68	21.58
TraesCS7B01G418400.1	Wheat	nucleus	12.5	21.47
TraesCS7B01G419400.1	Wheat	nucleus	12.32	21.43
TraesCS6B01G175100.2	Wheat	nucleus	13.57	21.41
TraesCS5B01G224100.1	Wheat	nucleus	11.96	20.3
TraesCS1B01G434300.1	Wheat	nucleus	22.68	20.29
TraesCS5B01G224000.1	Wheat	nucleus	11.43	19.34

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106
PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF34	SMART:SM00774	SUPFAM:SSF118290	EnsemblPlantsGene:TraesCS6B01G357600
EnsemblPlants:TraesCS6B01G357600.1	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:625778790..625781018

Molecular Weight (calculated)

58796.9 Da

IEP (calculated)

4.844

GRAVY (calculated)

-0.675

Length

560 amino acids

Sequence
(BLAST)

001: MSSSKRKRAD IDLERRDDDV DGGSGDHQPG EAAPRLQKEG QIKEGEAPAK EVVEVVVDRG GDGSKEEIKY GTQQGGVMEE DKQSAAAAAD NDGGDDIDDE
101: ESDGAGTRAE EKHMVEAAPG DGDGDHDHTA MAQDELSTMQ EEMEKMKEEN KMLRRVVDRT VRDYYELQTK LAAYQKQPAD QEPKETEVFL SLGGTAPAAA
201: AAVPEAKSKE DQAALRPSVG SDDTDDGKEG LGLSLSLRTS SYEDEARRDV VDGGAPDIVS DVGKARGYAL LESSRMSRPA SGDLAAVGGV GGQQGVNAAN
301: RKTRVSVRVR CQGPTMNDGC QWRKYGQKVA KGNPCPRAYY RCTVAPACPV RKQVQRCQED MSILITTYEG THNHPLPVGA TAMASTATAG AGAATFMLLS
401: STSSDAAVSG GPPAASSSYL SPYLQLNSSS QYHSSASPLM SGNMGGGGAQ HLSMFGHSSA LSAQPATHLK YPWPPNPSHG GGIGLGGGKR PFWGTVGVDD
501: VRPTALPDNA GTMASNPNQF SAAIATAISN VIGKDGQATR SKEGESSNKW GVVESLLPHE

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.