CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018203_P001	Maize	nucleus	86.51	86.36
TraesCS6B01G357600.1	Wheat	nucleus	60.55	62.5
TraesCS6D01G306300.1	Wheat	nucleus	60.03	62.08
TraesCS6A01G326500.2	Wheat	nucleus	58.82	61.48
Os02t0770500-00	Rice	nucleus	67.47	60.09
HORVU6Hr1G079710.2	Barley	nucleus	60.38	56.29
GSMUA_Achr3P20290_001	Banana	nucleus	32.18	48.56
GSMUA_Achr7P18820_001	Banana	nucleus	37.2	47.88
GSMUA_Achr10P...	Banana	nucleus	38.75	46.76
CDX81493	Canola	nucleus	23.88	44.52
GSMUA_Achr6P02330_001	Banana	nucleus	28.03	43.9
KRH42243	Soybean	nucleus	13.67	43.65
Bra004285.1-P	Field mustard	nucleus	24.22	42.68
CDX96044	Canola	nucleus	24.05	42.38
CDY01891	Canola	nucleus	23.7	41.77
PGSC0003DMT400076591	Potato	nucleus	28.03	39.23
AT1G68150.1	Thale cress	nucleus	24.74	38.24
Solyc01g104550.2.1	Tomato	nucleus	30.8	37.47
VIT_12s0055g00340.t01	Wine grape	nucleus	31.14	36.96
KRH58361	Soybean	nucleus	30.45	36.29
EES03177	Sorghum	nucleus	18.51	32.23
OQU75809	Sorghum	nucleus	26.64	24.64
EER88729	Sorghum	nucleus	14.19	23.56
EER90124	Sorghum	nucleus	13.84	23.39
EES02331	Sorghum	nucleus	22.15	23.36
EES02155	Sorghum	nucleus	22.84	23.16
EER98905	Sorghum	nucleus, plastid	12.98	22.94
KXG35639	Sorghum	nucleus	11.42	22.37
EES04642	Sorghum	nucleus	13.49	21.43
EES00609	Sorghum	nucleus	21.45	21.31
KXG22547	Sorghum	nucleus	22.32	20.44
KXG21247	Sorghum	nucleus	19.55	19.93

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8078942	UniProt:C5XSY1	ncoils:Coil	EnsemblPlants:EES05866
ProteinID:EES05866	ProteinID:EES05866.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429
PANTHER:PTHR31429:SF34	SMART:SM00774	EnsemblPlantsGene:SORBI_3004G312200	SUPFAM:SSF118290	unigene:Sbi.9188	UniParc:UPI0001A859DD
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_002452890.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:64900147..64902898

Molecular Weight (calculated)

61318.7 Da

IEP (calculated)

4.858

GRAVY (calculated)

-0.787

Length

578 amino acids

Sequence
(BLAST)

001: MSSKKKRAAI DLSLEVERSD EDHGSGGRGK GDRRRGKDDG EVDKKEEQFK EQGEEPKEET GEEEKVVVEV VVDQGGDGTK EIKYRTQQGE EMEDDKQSPA
101: DAHGDGESDG AEARAQDKHV VEAAGNGDGG DDSYTTMVQD EVSAMQEEME KMKEENRMLR RVVDRTVRDY YELQKKVEAC YQQQQADEPK EPEVFLSLGA
201: TAAGTGGAFP EPKRKERQAA RRPSVGSDDT DDDDAKEDLG LSLSLRASSY EEEKLEAGHD DVEGASVVGA DDGKAKGYTL LESSKLGAPA AGITSQSVNP
301: ANRKTRVSVR VRCQGPTMND GCQWRKYGQK VAKGNPCPRA YYRCTVAPGC PVRKQVQRCL EDMSILVTTY EGTHNHPLPV GATAMASTTS AAATFMLLSS
401: TTSSSSISEA GGGSAAPPYL STPYLLNSTS HHSAASPLLS APPSSSMPSS TPGAASGVQH LNMFGHSSSM LAQQAPHFGS NSKYPWSSDP LQGMGGGGGL
501: PAGSKRPFWS TGGDEKTATL PDNVGAVMAD PSKFSVAIAA AINSYMGKDG QVVGGKDGES SSSKSSNKWG VVESLPPP

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.