CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011237_P001	Maize	nucleus	63.25	70.47
Os01t0586800-00	Rice	nucleus	23.49	40.21
EES04642	Sorghum	nucleus	21.39	19.51
KXG35639	Sorghum	nucleus	17.17	19.32
EER90124	Sorghum	nucleus	19.58	19.01
EER98905	Sorghum	nucleus, plastid	18.67	18.96
EER88729	Sorghum	nucleus	19.58	18.68
EES05866	Sorghum	nucleus	32.23	18.51
EES02331	Sorghum	nucleus	29.52	17.88
EES02155	Sorghum	nucleus	29.22	17.02
EES00609	Sorghum	nucleus	29.82	17.01
OQU75809	Sorghum	nucleus	31.33	16.64
KXG21247	Sorghum	nucleus	26.51	15.52
KXG22547	Sorghum	nucleus	29.22	15.37
GSMUA_Achr5P09730_001	Banana	nucleus	24.1	11.24

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EntrezGene:8078230	UniProt:C5XPF8	EnsemblPlants:EES03177	ProteinID:EES03177
ProteinID:EES03177.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
InterPro:IPR003657	InterPro:IPR036576	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	EnsemblPlantsGene:SORBI_3003G200700	SUPFAM:SSF118290	UniParc:UPI0001A84E35	InterPro:WRKY_dom	InterPro:WRKY_dom_sf
RefSeq:XP_002458057.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:52845063..52846563

Molecular Weight (calculated)

33947.3 Da

IEP (calculated)

9.036

GRAVY (calculated)

-0.197

Length

332 amino acids

Sequence
(BLAST)

001: MELKTFVFKE LMRGAADKMK LGDEPAAGPF LSLSLGPANA IGASLRTRGG EAINASQAPP HAASNADDGI GLALGLRCDS DGGGEPVLAA VVGSAAGTKR
101: QRVAILSDDS GGNRGSNKAL RLPALLAPPQ QQRPAGRVTF RARCSAATVN DGCQWRKYGQ KVAKGNPCPR AYYRCTGAPD CPVRKKVQRC AHDAAVLVTT
201: YDGAHNHPLS PYAAAMASAM LASSSSSSSS ATAASCDDDA PRLAFPISVL PPAPQRYSCS RDVAIGAGPP PAAPAATSHG DLVPMANIMQ KAVGDPNFRA
301: AVMAAVASYV GEQCGGRNIS TTSSPCHLPA NN

Best Arabidopsis Sequence Match ( AT1G68150.1 )
(BLAST)

001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM

Arabidopsis Description

WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.