Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX96044 | Canola | nucleus | 96.04 | 96.04 |
CDX81493 | Canola | nucleus | 79.57 | 84.19 |
CDX86714 | Canola | nucleus | 19.21 | 74.12 |
AT1G68150.1 | Thale cress | nucleus | 77.13 | 67.65 |
PGSC0003DMT400076591 | Potato | nucleus | 43.9 | 34.87 |
Solyc01g104550.2.1 | Tomato | nucleus | 47.87 | 33.05 |
GSMUA_Achr6P02330_001 | Banana | nucleus | 36.89 | 32.79 |
GSMUA_Achr3P20290_001 | Banana | nucleus | 38.11 | 32.64 |
CDX97845 | Canola | nucleus | 23.78 | 32.37 |
VIT_12s0055g00340.t01 | Wine grape | nucleus | 47.56 | 32.03 |
KRH58361 | Soybean | nucleus | 43.6 | 29.48 |
GSMUA_Achr7P18820_001 | Banana | nucleus | 38.72 | 28.29 |
GSMUA_Achr10P... | Banana | nucleus | 37.5 | 25.68 |
TraesCS6D01G306300.1 | Wheat | nucleus | 40.55 | 23.79 |
CDY11652 | Canola | nucleus | 27.74 | 23.76 |
EES05866 | Sorghum | nucleus | 41.77 | 23.7 |
CDY26717 | Canola | nucleus | 20.73 | 23.69 |
TraesCS6A01G326500.2 | Wheat | nucleus | 39.94 | 23.69 |
CDY68857 | Canola | nucleus | 26.52 | 23.51 |
TraesCS6B01G357600.1 | Wheat | nucleus | 39.94 | 23.39 |
Zm00001d018203_P001 | Maize | nucleus | 40.85 | 23.14 |
CDX85563 | Canola | nucleus | 21.65 | 22.9 |
CDY56082 | Canola | nucleus | 25.91 | 22.19 |
HORVU6Hr1G079710.2 | Barley | nucleus | 40.24 | 21.29 |
CDX72327 | Canola | nucleus | 18.29 | 21.05 |
Os02t0770500-00 | Rice | nucleus | 41.16 | 20.8 |
CDX69548 | Canola | nucleus | 27.13 | 20.6 |
CDX75196 | Canola | nucleus | 17.68 | 20.49 |
CDX81900 | Canola | nucleus | 32.01 | 20.23 |
CDX83804 | Canola | nucleus | 31.71 | 20.19 |
CDX96692 | Canola | nucleus | 31.71 | 20.12 |
CDY63770 | Canola | nucleus | 31.4 | 20.04 |
CDY21693 | Canola | nucleus | 31.4 | 19.85 |
CDX70593 | Canola | nucleus | 31.4 | 19.58 |
CDX78611 | Canola | nucleus | 31.4 | 19.54 |
CDY39879 | Canola | nucleus | 18.29 | 19.54 |
CDY28692 | Canola | nucleus | 32.01 | 19.52 |
CDY07121 | Canola | nucleus | 29.27 | 19.39 |
CDY22006 | Canola | nucleus | 28.96 | 19.39 |
CDY22299 | Canola | nucleus | 17.07 | 19.31 |
CDY67287 | Canola | nucleus | 17.07 | 19.31 |
CDY16669 | Canola | nucleus | 28.96 | 19.31 |
CDX85052 | Canola | nucleus | 32.32 | 19.27 |
CDX69549 | Canola | nucleus | 32.32 | 19.24 |
CDX94553 | Canola | nucleus | 28.66 | 19.14 |
CDX68787 | Canola | nucleus | 18.6 | 19.12 |
CDX82900 | Canola | nucleus | 30.18 | 19.0 |
CDY24892 | Canola | nucleus | 30.18 | 18.89 |
CDX67971 | Canola | nucleus | 17.07 | 18.86 |
CDX79347 | Canola | nucleus | 17.07 | 18.79 |
CDY21301 | Canola | nucleus | 28.35 | 18.34 |
CDX90863 | Canola | nucleus | 28.35 | 18.34 |
CDX88573 | Canola | nucleus | 16.77 | 18.27 |
CDY19535 | Canola | nucleus | 30.49 | 18.12 |
CDY12937 | Canola | nucleus | 30.49 | 18.12 |
CDX87347 | Canola | nucleus | 16.46 | 18.0 |
CDY70096 | Canola | nucleus | 17.99 | 17.1 |
CDY08634 | Canola | nucleus | 25.0 | 16.3 |
CDY72612 | Canola | nucleus | 8.54 | 11.62 |
CDY19255 | Canola | nucleus | 8.23 | 11.34 |
CDX86713 | Canola | nucleus | 0.3 | 0.85 |
Protein Annotations
MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078EL60 | EnsemblPlants:CDY01891 | ProteinID:CDY01891 | ProteinID:CDY01891.1 |
ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00113080001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EBA197 | InterPro:WRKY_dom |
InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC06g29310D
Coordinates
chrLK031929:+:1059668..1061607
Molecular Weight (calculated)
37453.6 Da
IEP (calculated)
5.750
GRAVY (calculated)
-1.054
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLSLRLEKE KDEERSKHSC EKEEEDDDDG ASEDKDEQMV KEDEIEDFFL SSRTRKEENE REEMQIEMEH VKEENMRLRK LVEQTLQDYR QLEMKFPVID
101: HTDKMDLETF LGAQAKARKK GVERSASLPS VEGELGLSLS LQKKQKREES KAAESHNAQR YNSSSTIQGQ DTTQRVITSS PGNRKARVSV RARCETATMN
201: DGCQWRKYGQ KTAKGNPCPR AYYRCTVAPG CPVRKQVQRC FEDMSILITT YEGTHNHPLP VGATAMASTA STSSFLLLDS SDNLSRPSYF QQNGNDNRSI
301: RSLINFDDPS SRGGDHVSSS QNRLNWMM
101: HTDKMDLETF LGAQAKARKK GVERSASLPS VEGELGLSLS LQKKQKREES KAAESHNAQR YNSSSTIQGQ DTTQRVITSS PGNRKARVSV RARCETATMN
201: DGCQWRKYGQ KTAKGNPCPR AYYRCTVAPG CPVRKQVQRC FEDMSILITT YEGTHNHPLP VGATAMASTA STSSFLLLDS SDNLSRPSYF QQNGNDNRSI
301: RSLINFDDPS SRGGDHVSSS QNRLNWMM
001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
Arabidopsis Description
WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.