Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016535.1-P | Field mustard | nucleus | 91.49 | 99.79 |
| CDX83804 | Canola | nucleus | 97.68 | 98.06 |
| CDX86714 | Canola | nucleus | 14.7 | 89.41 |
| CDX86713 | Canola | nucleus | 18.38 | 80.51 |
| CDX81900 | Canola | nucleus | 80.08 | 79.77 |
| CDY21693 | Canola | nucleus | 79.11 | 78.81 |
| AT1G18860.1 | Thale cress | nucleus | 77.37 | 75.76 |
| CDY72612 | Canola | nucleus | 33.27 | 71.37 |
| CDY19255 | Canola | nucleus | 31.14 | 67.65 |
| CDY26717 | Canola | nucleus | 27.08 | 48.78 |
| CDX97845 | Canola | nucleus | 18.18 | 39.0 |
| CDY68857 | Canola | nucleus | 26.31 | 36.76 |
| CDY56082 | Canola | nucleus | 26.69 | 36.03 |
| CDY11652 | Canola | nucleus | 26.31 | 35.51 |
| PGSC0003DMT400046570 | Potato | nucleus | 35.78 | 35.24 |
| Solyc03g113120.2.1 | Tomato | nucleus | 35.59 | 35.11 |
| KRH63398 | Soybean | nucleus | 35.98 | 35.03 |
| CDX69548 | Canola | nucleus | 29.01 | 34.72 |
| CDY63770 | Canola | nucleus | 34.04 | 34.24 |
| Zm00001d045375_P001 | Maize | nucleus | 16.44 | 34.0 |
| CDX78611 | Canola | nucleus | 34.24 | 33.59 |
| CDX70593 | Canola | nucleus | 34.04 | 33.46 |
| CDX81493 | Canola | nucleus | 19.92 | 33.23 |
| KRH56941 | Soybean | nucleus | 35.78 | 33.09 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 31.33 | 33.06 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 31.14 | 32.72 |
| CDX69549 | Canola | nucleus | 34.43 | 32.3 |
| KRH03442 | Soybean | nucleus | 37.14 | 32.0 |
| CDX85052 | Canola | nucleus | 34.04 | 32.0 |
| Os01t0185900-01 | Rice | nucleus | 31.33 | 31.95 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 37.14 | 31.74 |
| CDY01891 | Canola | nucleus | 20.12 | 31.71 |
| CDX96044 | Canola | nucleus | 19.92 | 31.4 |
| KRH54509 | Soybean | nucleus | 37.33 | 31.38 |
| CDY28692 | Canola | nucleus | 32.3 | 31.04 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 31.53 | 30.99 |
| CDX85563 | Canola | nucleus | 18.57 | 30.97 |
| CDY21301 | Canola | nucleus | 29.01 | 29.59 |
| CDX90863 | Canola | nucleus | 28.82 | 29.39 |
| Solyc06g070990.2.1 | Tomato | nucleus | 36.75 | 29.28 |
| Zm00001d008794_P001 | Maize | nucleus | 30.37 | 29.07 |
| Os06t0146250-00 | Rice | nucleus | 33.85 | 28.97 |
| CDY16669 | Canola | nucleus | 27.47 | 28.86 |
| CDX94553 | Canola | nucleus | 27.27 | 28.72 |
| EES02331 | Sorghum | nucleus | 29.98 | 28.28 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 32.3 | 28.26 |
| Zm00001d039532_P001 | Maize | nucleus | 29.59 | 27.97 |
| OQU75809 | Sorghum | nucleus | 33.66 | 27.84 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 32.5 | 27.77 |
| CDY22006 | Canola | nucleus | 26.31 | 27.76 |
| CDX72327 | Canola | nucleus | 15.28 | 27.72 |
| CDY07121 | Canola | nucleus | 26.31 | 27.47 |
| CDX82900 | Canola | nucleus | 27.66 | 27.45 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 32.11 | 27.26 |
| CDX75196 | Canola | nucleus | 14.89 | 27.21 |
| CDY22299 | Canola | nucleus | 15.09 | 26.9 |
| CDY67287 | Canola | nucleus | 15.09 | 26.9 |
| CDY39879 | Canola | nucleus | 15.47 | 26.06 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 29.98 | 25.62 |
| CDX88573 | Canola | nucleus | 14.89 | 25.58 |
| CDX79347 | Canola | nucleus | 14.7 | 25.5 |
| CDY19535 | Canola | nucleus | 27.08 | 25.36 |
| CDY12937 | Canola | nucleus | 27.08 | 25.36 |
| CDX87347 | Canola | nucleus | 14.7 | 25.33 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 29.4 | 25.12 |
| CDX67971 | Canola | nucleus | 14.31 | 24.92 |
| CDX68787 | Canola | nucleus | 15.28 | 24.76 |
| CDY24892 | Canola | nucleus | 24.95 | 24.62 |
| CDY08634 | Canola | nucleus | 23.02 | 23.66 |
| CDY70096 | Canola | nucleus | 14.89 | 22.32 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078E6M8 | EnsemblPlants:CDX96692 | ProteinID:CDX96692 | ProteinID:CDX96692.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00102906001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EDB3D4 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaA08g22350D
Coordinates
chrLK031895:-:602522..605136
Molecular Weight (calculated)
57740.0 Da
IEP (calculated)
6.358
GRAVY (calculated)
-0.902
Length
517 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEFLGSG HGREERNEEM RKLDSDQEHD HIIRSKLDSI KVEMEEAKEE NRRLKSSLSR TKKEFEILQT QYNQLMVIIH EDPNKFSPKG YNQHKEEDEE
101: DKERTSDRED LVLLSLGRRL KSPVPSGSMT NKEEKMKDFM KETDDDKRIN EQGLSMGFEY KDLSNPSEKL EVDHNQEKTS LEVSNSNKIQ SENSFGFKND
201: GDEHEDKEEP LPQNIAKKTR VSVRARCETP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTI APSCPVRKQV QRCSEDLSIL ISTYEGTHSH PLPMSATAMA
301: SATSAAASML LSGASSSSSA ADLHGINFSI SSNSITPKPL LQTSSGHPTV TLDLTTTSSS QQPFLSMLNR FSVPPSNVPR SNSYPSTNLS FSNNTNTLMN
401: WGGGSNRNEQ YRAPYGNIST HQQSPFQHMI QTRAAGLSFD TFGRSSSSSP HPTQNSLDNV NFKNITHDQV QSLPAETIKA ITTDPNFQSA LATALSSIIG
501: GDLKIDNVTR SEAEKSP
101: DKERTSDRED LVLLSLGRRL KSPVPSGSMT NKEEKMKDFM KETDDDKRIN EQGLSMGFEY KDLSNPSEKL EVDHNQEKTS LEVSNSNKIQ SENSFGFKND
201: GDEHEDKEEP LPQNIAKKTR VSVRARCETP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTI APSCPVRKQV QRCSEDLSIL ISTYEGTHSH PLPMSATAMA
301: SATSAAASML LSGASSSSSA ADLHGINFSI SSNSITPKPL LQTSSGHPTV TLDLTTTSSS QQPFLSMLNR FSVPPSNVPR SNSYPSTNLS FSNNTNTLMN
401: WGGGSNRNEQ YRAPYGNIST HQQSPFQHMI QTRAAGLSFD TFGRSSSSSP HPTQNSLDNV NFKNITHDQV QSLPAETIKA ITTDPNFQSA LATALSSIIG
501: GDLKIDNVTR SEAEKSP
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.