Factsheet for Bra016535.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96692	Canola	nucleus	99.79	91.49
CDX83804	Canola	nucleus	97.47	89.71
Bra031053.1-P	Field mustard	nucleus	80.38	81.06
AT1G18860.1	Thale cress	nucleus	76.79	68.94
Bra025692.1-P	Field mustard	nucleus	30.17	59.34
Bra025693.1-P	Field mustard	nucleus	29.75	49.13
Bra007884.1-P	Field mustard	nucleus	27.85	34.46
Zm00001d045375_P001	Maize	nucleus	17.93	34.0
PGSC0003DMT400046570	Potato	nucleus	37.55	33.9
Solyc03g113120.2.1	Tomato	nucleus	37.13	33.59
Bra019123.1-P	Field mustard	nucleus	13.71	33.51
KRH63398	Soybean	nucleus	37.34	33.33
KRH56941	Soybean	nucleus	37.97	32.2
Bra006283.1-P	Field mustard	nucleus	35.65	32.07
Bra023505.1-P	Field mustard	nucleus	34.81	31.98
TraesCS3B01G130000.1	Wheat	nucleus	32.91	31.84
TraesCS3D01G113300.1	Wheat	nucleus	32.7	31.5
Os01t0185900-01	Rice	nucleus	32.91	30.77
VIT_17s0000g05810.t01	Wine grape	nucleus	39.03	30.58
Bra008719.1-P	Field mustard	nucleus	35.44	30.49
Bra004285.1-P	Field mustard	nucleus	21.1	30.49
KRH03442	Soybean	nucleus	38.4	30.33
KRH54509	Soybean	nucleus	38.82	29.92
HORVU3Hr1G020210.2	Barley	nucleus	33.12	29.85
Bra040505.1-P	Field mustard	nucleus	32.7	28.97
Solyc06g070990.2.1	Tomato	nucleus	38.4	28.04
Os06t0146250-00	Rice	nucleus	35.65	27.98
Zm00001d008794_P001	Maize	nucleus	31.65	27.78
TraesCS7D01G092500.2	Wheat	nucleus	34.6	27.75
Bra000793.1-P	Field mustard	nucleus	30.17	27.55
TraesCS7D01G092600.1	Wheat	nucleus	34.81	27.27
Bra029491.1-P	Field mustard	nucleus	28.06	27.03
EES02331	Sorghum	nucleus	31.01	26.82
HORVU7Hr1G021260.1	Barley	nucleus	34.39	26.77
OQU75809	Sorghum	nucleus	35.02	26.56
Bra036315.1-P	Field mustard	nucleus	27.43	26.53
Zm00001d039532_P001	Maize	nucleus	30.59	26.51
Bra013584.1-P	Field mustard	nucleus	29.54	26.02
Bra008435.1-P	Field mustard	nucleus	15.61	25.52
TraesCS7D01G092400.1	Wheat	nucleus	32.07	25.12
Bra010220.1-P	Field mustard	nucleus	16.03	24.68
TraesCS7D01G092300.1	Wheat	nucleus	31.43	24.63
Bra027057.1-P	Field mustard	nucleus	28.27	24.28
Bra035148.1-P	Field mustard	nucleus	15.19	24.0
Bra003588.1-P	Field mustard	nucleus	14.77	23.57
Bra011299.1-P	Field mustard	nucleus	15.61	23.34
Bra034482.1-P	Field mustard	nucleus	24.47	22.88
Bra023983.1-P	Field mustard	nucleus	15.61	21.45
TraesCS7A01G096200.1	Wheat	nucleus	9.28	18.18
Bra016263.1-P	Field mustard	nucleus	27.85	17.65

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra016535	EnsemblPlants:Bra016535.1	EnsemblPlants:Bra016535.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4DJ57	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002546F35	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT1G18860 (E=3e-163) WRKY61, ATWRKY61 | WRKY61; transcription factor

Coordinates

chrA08:-:18919484..18921382

Molecular Weight (calculated)

52585.1 Da

IEP (calculated)

6.795

GRAVY (calculated)

-0.846

Length

474 amino acids

Sequence
(BLAST)

001: MEEAKEENRR LKSSLSRTKK EFEILQTQYN QLMVIIHEDP NKFSPKGYNQ HKEEDEEDKE RTSDREDLVL LSLGRRLKSP VPSGSMTNKE EKMKDFMKET
101: DDDKRINEQG LSMGFEYKDL SNPSEKLEVD HNQEKTSLEV SNSNKIQSEN SFGFKNDGDE HEDKEEPLPQ NIAKKTRVSV RARCETPTMN DGCQWRKYGQ
201: KIAKGNPCPR AYYRCTIAPS CPVRKQVQRC SEDLSILIST YEGTHSHPLP MSATAMASAT SAAASMLLSG ASSSSSAADL HGINFSISSN SITPKPLLQT
301: SSGHPTVTLD LTTTSSSQQP LLSMLNRFSV PPSNVPRSNS YPSTNLSFSN NTNTLMNWGG GSNRNEQYRA PYGNISTHQQ SPFQHMIQTR AAGLSFDTFG
401: RSSSSSPHPT QNSLDNVNFK NITHDQVQSL PAETIKAITT DPNFQSALAT ALSSIIGGDL KIDNVTRSEA EKSP

Best Arabidopsis Sequence Match ( AT1G18860.1 )
(BLAST)

001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP

Arabidopsis Description

WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.