Factsheet for Bra023505.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85563	Canola	nucleus	51.74	86.13
Bra006283.1-P	Field mustard	nucleus	81.4	79.7
AT5G15130.1	Thale cress	nucleus	84.11	79.2
Bra008719.1-P	Field mustard	nucleus	82.36	77.13
Bra040505.1-P	Field mustard	nucleus	59.88	57.76
Zm00001d045375_P001	Maize	nucleus	20.54	42.4
GSMUA_Achr1P05240_001	Banana	nucleus	26.74	42.33
VIT_14s0108g00120.t01	Wine grape	nucleus	41.09	42.23
Solyc02g067430.2.1	Tomato	nucleus	34.5	40.45
PGSC0003DMT400017859	Potato	nucleus	34.69	40.41
Bra025693.1-P	Field mustard	nucleus	21.9	39.37
KRG93506	Soybean	nucleus	37.21	39.18
KRH01137	Soybean	nucleus	38.37	36.6
KRH40121	Soybean	nucleus	38.18	36.41
Bra031053.1-P	Field mustard	nucleus	33.14	36.38
Bra016535.1-P	Field mustard	nucleus	31.98	34.81
Bra007884.1-P	Field mustard	nucleus	25.78	34.73
Bra019123.1-P	Field mustard	nucleus	12.79	34.02
TraesCS3B01G130000.1	Wheat	nucleus	31.78	33.47
TraesCS7D01G092400.1	Wheat	nucleus	39.15	33.39
TraesCS3D01G113300.1	Wheat	nucleus	31.78	33.33
TraesCS7D01G092300.1	Wheat	nucleus	38.57	32.89
Os01t0185900-01	Rice	nucleus	31.98	32.54
Os06t0146250-00	Rice	nucleus	37.79	32.28
OQU75809	Sorghum	nucleus	38.37	31.68
HORVU3Hr1G020210.2	Barley	nucleus	31.98	31.37
Bra004285.1-P	Field mustard	nucleus	19.77	31.1
TraesCS7D01G092600.1	Wheat	nucleus	35.27	30.08
TraesCS7D01G092500.2	Wheat	nucleus	34.3	29.95
Zm00001d008794_P001	Maize	nucleus	31.2	29.81
HORVU7Hr1G021260.1	Barley	nucleus	35.08	29.72
EES02331	Sorghum	nucleus	30.23	28.47
Bra036315.1-P	Field mustard	nucleus	26.94	28.37
Zm00001d039532_P001	Maize	nucleus	30.04	28.34
Bra008435.1-P	Field mustard	nucleus	15.31	27.24
Bra003588.1-P	Field mustard	nucleus	15.12	26.26
Bra029491.1-P	Field mustard	nucleus	25.0	26.22
Bra010220.1-P	Field mustard	nucleus	15.5	25.97
Bra035148.1-P	Field mustard	nucleus	14.92	25.67
Bra011299.1-P	Field mustard	nucleus	15.5	25.24
Bra013584.1-P	Field mustard	nucleus	25.78	24.72
Bra000793.1-P	Field mustard	nucleus	24.81	24.66
Bra023983.1-P	Field mustard	nucleus	16.28	24.35
Bra027057.1-P	Field mustard	nucleus	25.39	23.73
Bra034482.1-P	Field mustard	nucleus	21.51	21.89
Bra025692.1-P	Field mustard	nucleus	10.08	21.58
Bra016263.1-P	Field mustard	nucleus	27.52	18.98

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra023505	EnsemblPlants:Bra023505.1	EnsemblPlants:Bra023505.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4E402	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002543643	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT5G15130 (E=2e-134) WRKY72, ATWRKY72 | WRKY72; transcription factor

Coordinates

chrA02:+:3670075..3672253

Molecular Weight (calculated)

55321.3 Da

IEP (calculated)

7.565

GRAVY (calculated)

-0.582

Length

516 amino acids

Sequence
(BLAST)

001: MEVLLKLPTS DSLLTVKDHG SAKIHEAIKG DGDHQELESA KAEMSEVKQE NEKLKGMLER IESDYKSLKL RLFDVIQHEP SNNPTHQSVV DLRTDLSSLD
101: QEGELVSFSL GRRSSSPSDN TSKKEEKADA ITKEVNSDEE LTKAGLTLGF NNGNDREPNK SLSIVDSLEE ASKVTGKRSS PSPLASGGDA DGEAGQQNNV
201: KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHPLPLSA TTMASTTSAA ASMLLSGSSS
301: SSAAKMIGNN LYDSSRFINN SKSFYAPTLH SPLHPTVTLD LTAPQHSSSS SLPSLNFNKI SNSFQRFPST NLNFSSSSSY TPYPYNNVQF GGSNLGKTAQ
401: NSQSLTETLT KVLTSDPSFH SVVAAAISSM VGSNGEQQIA GPRPSISNSI QPTAATNNNK GCGGYFSSLL TSNIITNNQM GASLGQPSSQ LPPLSVFNHP
501: SSSSSTATFV NKDEKS

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.