Factsheet for Bra007884.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001585.1-P
Bra007884.1-P
Bra010220.1-P
Bra016263.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G69810.1	Bra007884.1-P	AT1G69810.1	21798944
AT1G69810.1	Bra016263.1-P	AT1G69810.1	21798944
AT1G69810.1	Bra010220.1-P	AT2G25000.1	21798944
AT1G69810.1	Bra001585.1-P	AT3G15160.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56082	Canola	nucleus	98.96	98.96
AT1G69810.1	Thale cress	nucleus	72.32	71.58
Bra016263.1-P	Field mustard	nucleus	61.88	31.68
Bra025693.1-P	Field mustard	nucleus	20.89	27.87
Bra016535.1-P	Field mustard	nucleus	34.46	27.85
Bra031053.1-P	Field mustard	nucleus	33.42	27.23
Bra019123.1-P	Field mustard	nucleus	13.58	26.8
Bra004285.1-P	Field mustard	nucleus	22.45	26.22
Bra023505.1-P	Field mustard	nucleus	34.73	25.78
Bra006283.1-P	Field mustard	nucleus	33.68	24.48
Bra008435.1-P	Field mustard	nucleus	18.02	23.79
Bra008719.1-P	Field mustard	nucleus	34.2	23.77
Bra036315.1-P	Field mustard	nucleus	30.03	23.47
Bra035148.1-P	Field mustard	nucleus	18.02	23.0
Bra003588.1-P	Field mustard	nucleus	17.75	22.9
Bra029491.1-P	Field mustard	nucleus	28.72	22.36
Bra027057.1-P	Field mustard	nucleus	32.11	22.28
Bra040505.1-P	Field mustard	nucleus	31.07	22.24
Bra000793.1-P	Field mustard	nucleus	29.5	21.77
Bra013584.1-P	Field mustard	nucleus	30.55	21.75
Bra010220.1-P	Field mustard	nucleus	16.97	21.1
Bra034482.1-P	Field mustard	nucleus	27.68	20.91
Bra011299.1-P	Field mustard	nucleus	16.71	20.19
Bra023983.1-P	Field mustard	nucleus	16.71	18.55
Bra025692.1-P	Field mustard	nucleus	11.49	18.26

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	EnsemblPlantsGene:Bra007884	EnsemblPlants:Bra007884.1	EnsemblPlants:Bra007884.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657
InterPro:IPR036576	UniProt:M4CUI9	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000254687B	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

AT1G69810 (E=5e-111) WRKY36, ATWRKY36 | WRKY36; transcription factor

Coordinates

chrA02:-:11576278..11578396

Molecular Weight (calculated)

42992.2 Da

IEP (calculated)

7.688

GRAVY (calculated)

-0.889

Length

383 amino acids

Sequence
(BLAST)

001: MIKEEIDSCV HPLDGGMAES DKEVELDATK AKVDKVREEN EKLKLLLSTV RTEYNSLQMH VSNVIRQQHE ASMKLDDNGH EDLDVDISLT LGRSEQKISK
101: KEEQVKKIIA ENNSIKNKEG SEKKRWAHGL AFRIQSFEDP DTNQTMRLDN LSKEVKNKSV ENKYLSSRKD VKTARNEDQH ELLEGHEQPG LKKTRVCVKA
201: PCEDPSINDG CQWRKYGQKT AKTNPLPRAY YRCSMSSNCP VRKQVQRCGE DDTSAYMTTY EGNHDHPLPM EATHMAAGTS AAASLLQSGA SSSASLSHFF
301: PFHHFSVSTT NSHPTVTLDL TQPNYDPNQL PNYPLSSSSL SFSSSGRPSP SKSHTLSFSG LRSQAPMNTY SHLSHHTRLF GRQ

Best Arabidopsis Sequence Match ( AT1G69810.1 )
(BLAST)

001: MIKEETVSYF QTFDGVMAES DKEEELDATK AKVEKVREEN EKLKLLLSTI LNNYNSLQMQ VSKVLGQQQG ASSMELDHID RQDENNDYDV DISLRLGRSE
101: QKISKKEENK VDKISTKNVE ESKDKRSALG FGFQIQSYEA SKLDDLCRQV KLANAENKCV SSRKDVKSVR NENHQDVLEE HEQTGLKKTR VCVKASCEDP
201: SINDGCQWRK YGQKTAKTNP LPRAYYRCSM SSNCPVRKQV QRCGEEETSA FMTTYEGNHD HPLPMEASHM AAGTSAAASL LQSGSSSSSS STSASLSYFF
301: PFHHFSISTT NSHPTVTLDL TRPNYPNQLP DDYPLSSSSF SLNFSSPDPP PPSSHDHTLN FSGLRTQAPL STDSLLARYR TRLSGQQ

Arabidopsis Description

WRKY36At1g69810 [Source:UniProtKB/TrEMBL;Acc:Q058I4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.