Factsheet for Bra001585.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra009783.1-P
Bra020466.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G15160.1	Bra009783.1-P	AT5G24660.1	21798944
AT3G15160.1	Bra020466.1-P	AT5G24660.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82445	Canola	cytosol	99.11	99.11
AT3G15160.1	Thale cress	cytosol	94.48	94.48
VIT_19s0177g00260.t01	Wine grape	cytosol, peroxisome, plasma membrane	75.62	74.69
KRH55679	Soybean	cytosol, peroxisome, plasma membrane	72.06	71.68
Solyc10g006410.2.1	Tomato	cytosol	70.28	69.54
PGSC0003DMT400037306	Potato	cytosol, mitochondrion, plastid	32.74	66.91
PGSC0003DMT400037304	Potato	cytosol	23.67	65.52
GSMUA_Achr3P23110_001	Banana	cytosol, extracellular	21.89	65.08
GSMUA_Achr3P23120_001	Banana	cytosol	45.73	63.3
Os04t0626900-01	Rice	plasma membrane	63.7	62.59
TraesCS2B01G497400.1	Wheat	plastid	63.52	62.41
TraesCS2D01G473600.2	Wheat	cytosol	63.52	62.41
TraesCS2A01G473900.1	Wheat	cytosol	63.35	62.24
EES11468	Sorghum	cytosol, peroxisome, plasma membrane, plastid	62.1	60.91
HORVU2Hr1G106960.1	Barley	plastid	63.17	58.97
Zm00001d002235_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	60.5	51.05

Protein Annotations

EnsemblPlants:Bra001585.1	EnsemblPlants:Bra001585.1-P	EnsemblPlantsGene:Bra001585	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0016020	GO:GO:0044599	InterPro:AP5Z1
InterPro:ARM-type_fold	PANTHER:PTHR12181	PANTHER:PTHR12181:SF29	PFAM:PF14764	SEG:seg	SUPFAM:SSF48371
UniParc:UPI0002540A37	UniProt:M4CBK5	MapMan:22.5.5.4.1	:	:	:

Description

AT3G15160 (E=3e-259) | unknown protein

Coordinates

chrA03:+:17206006..17209046

Molecular Weight (calculated)

62407.0 Da

IEP (calculated)

6.388

GRAVY (calculated)

-0.124

Length

562 amino acids

Sequence
(BLAST)

001: MNDQEGDWNY HLRILSNSAR DSTDPASDPS VLQSVKKLHG FCKLENSDDL VARIYPQINK VFQRSVASLS QSESGTSKGL LLLAILQFFL DFGDMVLHDA
101: DPSLRTFFHS CLSREFSDAA VAEATCEFLI ENKRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSILDLP MLVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRPSPA LNTALQAAAS GPRSERMMQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMARNSTMFP DKNFSHEIRR RLLEFVLAAF QKSPNFIALL KKPIIDRLGE AYDDPAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLLYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV RSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG DKMVAHIPFH ILSEQGGPPF HDFALSDVII KN

Best Arabidopsis Sequence Match ( AT3G15160.1 )
(BLAST)

001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN

Arabidopsis Description

AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.