Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400037306 | Potato | cytosol, mitochondrion, plastid | 47.71 | 98.55 |
| PGSC0003DMT400037304 | Potato | cytosol | 33.98 | 95.07 |
| VIT_19s0177g00260.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 75.88 | 75.75 |
| KRH55679 | Soybean | cytosol, peroxisome, plasma membrane | 71.83 | 72.21 |
| Bra001585.1-P | Field mustard | cytosol | 69.54 | 70.28 |
| CDX75812 | Canola | cytosol | 69.37 | 70.11 |
| CDX82445 | Canola | cytosol | 69.19 | 69.93 |
| AT3G15160.1 | Thale cress | cytosol | 69.01 | 69.75 |
| GSMUA_Achr3P23110_001 | Banana | cytosol, extracellular | 22.36 | 67.2 |
| GSMUA_Achr3P23120_001 | Banana | cytosol | 45.77 | 64.04 |
| Os04t0626900-01 | Rice | plasma membrane | 63.2 | 62.76 |
| TraesCS2B01G497400.1 | Wheat | plastid | 62.32 | 61.89 |
| TraesCS2D01G473600.2 | Wheat | cytosol | 62.32 | 61.89 |
| TraesCS2A01G473900.1 | Wheat | cytosol | 61.97 | 61.54 |
| EES11468 | Sorghum | cytosol, peroxisome, plasma membrane, plastid | 61.8 | 61.26 |
| HORVU2Hr1G106960.1 | Barley | plastid | 62.15 | 58.64 |
| Zm00001d002235_P002 | Maize | cytosol, peroxisome, plasma membrane, plastid | 59.51 | 50.75 |
Protein Annotations
| EnsemblPlants:Solyc10g006410.2.1 | EnsemblPlantsGene:Solyc10g006410.2 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0016020 | GO:GO:0044599 | InterPro:AP5Z1 | InterPro:ARM-type_fold |
| PANTHER:PTHR12181 | PANTHER:PTHR12181:SF29 | PFAM:PF14764 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI000276AB91 |
| UniProt:K4CXH2 | MapMan:22.5.5.4.1 | : | : | : | : |
Description
No Description!
Coordinates
chr10:+:1020301..1029333
Molecular Weight (calculated)
62541.5 Da
IEP (calculated)
6.784
GRAVY (calculated)
0.007
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEDKFKQF DFHLRSLSSS ARDSNFVTDP ASDPSLLNSV KSLCDLCRSE KSEDLIARVY PHLNRIFQRC LSSISQSQTS NGLLLLAILQ FFLDFGDVVL
101: HDADPNLRTF FKSCLSREFA DPVVAEATLD FLNANKKKFS SSFPTLLPQF FPLLLKLIAW NGEKLEKAFR RVFPGLISQG SFLPLFPSII DLPILVVALE
201: KVEKSSGSLV GSSIASIQKS SAPEMLLALM DEAYTGSTIG DGGADSESED SSTMAVADPF FLELLKDEND GLAERHWASP AVAAAIQSAV STSMSDRLKQ
301: ALRITPRLLD MYTAIAIREV NDSLICALVP LLMARYSNLF PEKLFLYEVQ KRILELMLAG FNRSPSFIAL LKKPIVDRLG EAYDSPSKTE LALQLCWAIG
401: EHGGGGEAHK DAARELFESL ELLLYENLSS SRVRLRESAL GSDSAKSRKS SQSRLLCFVV TAIAKLATYH RELLPRARVS LTKVARSRIS DARVWKRARD
501: YLGLMNEPAI CLSILGPCES PSKGIQKLGT VNWSEGGTKM ISHLPFYLLG AQEGPPHDFS LMDVLPGS
101: HDADPNLRTF FKSCLSREFA DPVVAEATLD FLNANKKKFS SSFPTLLPQF FPLLLKLIAW NGEKLEKAFR RVFPGLISQG SFLPLFPSII DLPILVVALE
201: KVEKSSGSLV GSSIASIQKS SAPEMLLALM DEAYTGSTIG DGGADSESED SSTMAVADPF FLELLKDEND GLAERHWASP AVAAAIQSAV STSMSDRLKQ
301: ALRITPRLLD MYTAIAIREV NDSLICALVP LLMARYSNLF PEKLFLYEVQ KRILELMLAG FNRSPSFIAL LKKPIVDRLG EAYDSPSKTE LALQLCWAIG
401: EHGGGGEAHK DAARELFESL ELLLYENLSS SRVRLRESAL GSDSAKSRKS SQSRLLCFVV TAIAKLATYH RELLPRARVS LTKVARSRIS DARVWKRARD
501: YLGLMNEPAI CLSILGPCES PSKGIQKLGT VNWSEGGTKM ISHLPFYLLG AQEGPPHDFS LMDVLPGS
001: MSDQEGDWDF YLRILSNSAR DSTDPASDPS ILQSVKKLHG FCKMEKSDDL VARIYPQFNK VFHRSVASLS QSESGASKGL LLLAILQFFL DFGDMVLHDS
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
101: DPSLRTFFRS CLSREFSDAA VAEATCEFLV VNQRKLLASF PNLLPQFFPL LLKLIAWNWE KLEKSFLKIF PGLISPGSFL PLFPSIVDLP ILVVALEKVE
201: RSSGSGSRVG GSIASIQKSA APEMLLALMD EAYTGSTIGD GGDDSESEDN NTIDVADPLF LELLKDENDG LAERHRASPT LNAALQAAAS GPRSERMKQT
301: LKIAPRLLDV YFSVTLRDAN DSLICALIPL LMTRNSTMFP DKIFSHEIRR RLLEFVLAAF QRSPNFIALL KKPIIDRLGE AYDDVAKREL ALQLCWAIGE
401: YGGGGESHKE AARELFESLE LLVYENLSSS RLGLRQESGN GSRRTTQSRL LCFVVTAIAK LATYHRELLP RARVALGKVV KSRISDARVW RRAHDYLGLM
501: NEPGICWSVL GPSRVSEKRF PGTVNWSEGG QKMVAHIPFH ILSEQGGPPF HDFAFSDIIP KN
Arabidopsis Description
AP-5 complex subunit zeta-1 [Source:UniProtKB/TrEMBL;Acc:Q8H1F1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.