Factsheet for Solyc09g011030.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g103220.2.1
Solyc11g042420.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	Solyc01g103220.2.1	AT4G10040.1	21798944
AT5G02150.1	Solyc11g042420.1.1	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022748	Potato	nucleus	96.98	96.98
VIT_08s0007g00740.t01	Wine grape	nucleus	68.77	84.78
AT3G09350.1	Thale cress	cytosol	70.78	77.41
Bra029761.1-P	Field mustard	cytosol	71.54	77.38
CDY41617	Canola	cytosol	71.54	77.38
CDY44699	Canola	cytosol	71.28	77.11
KRH65920	Soybean	cytosol	73.55	76.04
CDX73975	Canola	cytosol	67.76	75.14
CDY07920	Canola	cytosol	67.25	74.58
KRH75713	Soybean	cytosol	72.29	74.35
Bra001314.1-P	Field mustard	cytosol	66.25	73.46
GSMUA_Achr10P...	Banana	cytosol	70.78	72.05
AT5G02150.1	Thale cress	cytosol	55.67	68.21
Bra007027.1-P	Field mustard	cytosol	61.96	67.77
CDY65836	Canola	cytosol	61.96	67.77
AT3G53800.1	Thale cress	cytosol	61.71	67.49
CDX73524	Canola	cytosol	60.96	66.67
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	58.19	60.16
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	57.93	59.9
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	57.93	59.74
HORVU4Hr1G060150.6	Barley	mitochondrion	56.93	59.16
GSMUA_Achr7P15030_001	Banana	extracellular	21.66	56.58
TraesCS4B01G208900.3	Wheat	mitochondrion	56.93	55.12
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	56.68	54.61
TraesCS4A01G095500.1	Wheat	mitochondrion	53.4	53.13
CDX85186	Canola	mitochondrion	13.85	35.26
Solyc04g009320.2.1	Tomato	golgi	20.4	21.54

Protein Annotations

EnsemblPlants:Solyc09g011030.2.1	EnsemblPlantsGene:Solyc09g011030.2	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	InterPro:TOG	ncoils:Coil	PANTHER:PTHR19316
PANTHER:PTHR19316:SF27	PFAM:PF08609	SEG:seg	SMART:SM01349	SUPFAM:SSF48371	UniParc:UPI000276B12F
UniProt:K4CRC9	MapMan:19.1.5.4	:	:	:	:

Description

No Description!

Coordinates

chr9:-:4368272..4373182

Molecular Weight (calculated)

43467.3 Da

IEP (calculated)

4.759

GRAVY (calculated)

-0.517

Length

397 amino acids

Sequence
(BLAST)

001: MAKEGPNWDG LLKWSLSHAD GTKPPPRNLS EEDRRWFMEA MQAQTVDVIK RMKEITLVMQ TPEQVLESQG VTSQDIEDML DELQEHVESI DMANDLNSIG
101: GLVPLLGYLK NSHANIRAKA AEVVSTIVQN NPRSQQLVME ANGLEPLLSN FTSDPDVTAR TKALGAISSL IRHNKPAIAA FRLANGYAGL RDALSSESVR
201: FQRKALNLIH YLLHENHSDC NVVTELGFPR VMMHLASSDD GEVREGALQG LLDLAQDKTG EVAGSSSTEE NEKLKQILQE RIKGISSMSP EDLGAAKEER
301: QLVDSLWNTC YNEPSSLREK GLVVLPGEDA LPPDVASKHF EPPLRAWAAN RNEDTKPSNE KKQAPLLLGL GPPTQGPPVQ NSSSGAMSGE ENRDTSA

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.