CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY07920	Canola	cytosol	94.97	94.97
Bra001314.1-P	Field mustard	cytosol	94.13	94.13
CDY41617	Canola	cytosol	89.11	86.92
CDY44699	Canola	cytosol	87.99	85.83
AT3G09350.1	Thale cress	cytosol	86.03	84.85
VIT_08s0007g00740.t01	Wine grape	nucleus	63.69	70.81
Solyc09g011030.2.1	Tomato	cytosol	75.14	67.76
PGSC0003DMT400022748	Potato	nucleus	74.86	67.51
KRH75713	Soybean	cytosol	72.35	67.1
KRH65920	Soybean	cytosol	71.51	66.67
GSMUA_Achr10P...	Banana	cytosol	69.27	63.59
CDY65836	Canola	cytosol	63.13	62.26
CDX73524	Canola	cytosol	62.85	61.98
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	60.61	56.51
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	59.78	55.73
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	59.78	55.58
HORVU4Hr1G060150.6	Barley	mitochondrion	56.98	53.4
GSMUA_Achr7P15030_001	Banana	extracellular	22.07	51.97
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	57.26	49.76
TraesCS4B01G208900.3	Wheat	mitochondrion	56.98	49.76
TraesCS4A01G095500.1	Wheat	mitochondrion	53.63	48.12
CDX85186	Canola	mitochondrion	14.25	32.69
CDX73670	Canola	extracellular	24.3	22.89
CDX78051	Canola	extracellular	24.02	22.63

Protein Annotations

EnsemblPlants:CDX73975	EnsemblPlantsGene:GSBRNA2T00111707001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	InterPro:TOG	ncoils:Coil	PANTHER:PTHR19316
PANTHER:PTHR19316:SF27	PFAM:PF08609	ProteinID:CDX73975	ProteinID:CDX73975.1	SMART:SM01349	SUPFAM:SSF48371
UniParc:UPI0004EE0CCE	MapMan:19.1.5.4	:	:	:	:

Description

BnaA03g30720D

Coordinates

chrLK031800:+:767534..769356

Molecular Weight (calculated)

39320.7 Da

IEP (calculated)

4.685

GRAVY (calculated)

-0.305

Length

358 amino acids

Sequence
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTQPTRQLSE EERKWFMEAM QSQTVDVVKR MKEITLVMQT PQHVLVDHGV TSQDIEDLLD ELQEHVESID MANDLHSIGG
101: LIPLLGFLKN SHANIRAKAA DVVRTIVQNN PRSQELVMEA NGLESLLSNF TSDADVHART QALGTISSLI RHNKAGVTAF KLADGYAGLR DAMASDSVRF
201: QRKALNLLQY LLQEDASDRS VATGLGFARV LIHLASSDDA ETREAALGVL LELARGKNDG RGCSSVELRQ LLEERIEGIS SMSQEDLETV KEERQLVDAL
301: WRVCYDEPSS LGEKGLLVLP GEDALPPDVA SKLLEPLLRA SAANGNATEK KEEPVKLL

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.