CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007027.1-P	Field mustard	cytosol	99.72	99.72
CDX73524	Canola	cytosol	98.07	98.07
AT3G53800.1	Thale cress	cytosol	90.91	90.91
VIT_08s0007g00740.t01	Wine grape	nucleus	61.71	69.57
CDY44699	Canola	cytosol	67.49	66.76
CDY41617	Canola	cytosol	66.67	65.94
CDY07920	Canola	cytosol	62.53	63.41
CDX73975	Canola	cytosol	62.26	63.13
KRH65920	Soybean	cytosol	66.67	63.02
PGSC0003DMT400022748	Potato	nucleus	68.32	62.47
KRH75713	Soybean	cytosol	66.12	62.18
Solyc09g011030.2.1	Tomato	cytosol	67.77	61.96
GSMUA_Achr10P...	Banana	cytosol	64.74	60.26
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	60.06	56.77
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	60.06	56.62
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	58.68	55.47
HORVU4Hr1G060150.6	Barley	mitochondrion	56.75	53.93
GSMUA_Achr7P15030_001	Banana	extracellular	21.76	51.97
TraesCS4B01G208900.3	Wheat	mitochondrion	56.75	50.24
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	57.02	50.24
CDX85186	Canola	mitochondrion	21.21	49.36
TraesCS4A01G095500.1	Wheat	mitochondrion	52.07	47.37
CDX78051	Canola	extracellular	23.42	22.37
CDX73670	Canola	extracellular	23.42	22.37

Protein Annotations

EnsemblPlants:CDY65836	EnsemblPlantsGene:GSBRNA2T00048328001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	InterPro:TOG	ncoils:Coil	PANTHER:PTHR19316
PANTHER:PTHR19316:SF27	PFAM:PF08609	ProteinID:CDY65836	ProteinID:CDY65836.1	SMART:SM01349	SUPFAM:SSF48371
UniParc:UPI0004EE4C65	UniProt:A0A078JJ67	MapMan:19.1.5.4	:	:	:

Description

BnaA09g54760DBnaA09g54760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JJ67]

Coordinates

chrLK034971:-:9715..11717

Molecular Weight (calculated)

41188.1 Da

IEP (calculated)

4.648

GRAVY (calculated)

-0.391

Length

363 amino acids

Sequence
(BLAST)

001: MANNGPSWDG LLKWSLSHSD GASPSRPLSE EDRQWFMEAM QGHTIDSISR MKQISQIMKM PEQLLESQGV TTDDLEGMLD ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKAA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF ITDPDIRVRT KALGAISSLI RHNQQGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLIHY LLQESNSDCR IVRDLGFPRV MIHLASNQDL EVREFALRGL LELTREESDR NLDRADVNLR QLLEERTRRI IAMSEEDLCA AREERELVDI
301: LWTVCYDEPS LLRERGLVYL PCDDEMAPDV VRDRFEPPLR AWAARRDDEI NEPPVPLLLG PAQ

Best Arabidopsis Sequence Match ( AT3G53800.1 )
(BLAST)

001: MANNGPNWDG LLKWSLSHSD GASSSSRISE EDRQWFVEAM QAHTIDSISR MKVISQIMKM PEQVLEAQGV TPDDLEGMLA ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKSA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF IADPDIRVRT KALGAISSLI RNNQPGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLLHY LLQESNSDCK IVRDLGFPRI MIHLASNQDF EVREFALRGL LELAREESVR NLDRGDVNLR QLLEERTRRI IVMSDEDLCA AREERQLVDS
301: LWTVCYDEPS LLRERGLVYL PSDDELAPDV VRDRFEPPLR AWAARRHDET SESPVPLLLG PAP

Arabidopsis Description

Fes1BFes1B [Source:UniProtKB/TrEMBL;Acc:Q9M346]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.