Factsheet for Bra007027.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65836	Canola	cytosol	99.72	99.72
CDX73524	Canola	cytosol	97.8	97.8
AT3G53800.1	Thale cress	cytosol	90.91	90.91
VIT_08s0007g00740.t01	Wine grape	nucleus	61.71	69.57
Bra029761.1-P	Field mustard	cytosol	67.22	66.48
KRH65920	Soybean	cytosol	66.67	63.02
Bra001314.1-P	Field mustard	cytosol	61.98	62.85
PGSC0003DMT400022748	Potato	nucleus	68.32	62.47
KRH75713	Soybean	cytosol	66.12	62.18
Solyc09g011030.2.1	Tomato	cytosol	67.77	61.96
GSMUA_Achr10P...	Banana	cytosol	64.74	60.26
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	60.06	56.77
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	60.06	56.62
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	58.68	55.47
HORVU4Hr1G060150.6	Barley	mitochondrion	56.75	53.93
GSMUA_Achr7P15030_001	Banana	extracellular	21.76	51.97
TraesCS4B01G208900.3	Wheat	mitochondrion	56.75	50.24
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	57.02	50.24
CDX85186	Canola	mitochondrion	20.94	48.72
TraesCS4A01G095500.1	Wheat	mitochondrion	52.07	47.37
Bra006889.1-P	Field mustard	extracellular	23.97	22.89

Protein Annotations

EnsemblPlants:Bra007027.1	EnsemblPlants:Bra007027.1-P	EnsemblPlantsGene:Bra007027	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	InterPro:TOG	ncoils:Coil
PANTHER:PTHR19316	PANTHER:PTHR19316:SF27	PFAM:PF08609	SMART:SM01349	SUPFAM:SSF48371	UniParc:UPI0002542F9D
UniProt:M4CS35	MapMan:19.1.5.4	:	:	:	:

Description

AT3G53800 (E=8e-188) | armadillo/beta-catenin repeat family protein

Coordinates

chrA09:+:26895679..26897465

Molecular Weight (calculated)

41200.2 Da

IEP (calculated)

4.648

GRAVY (calculated)

-0.377

Length

363 amino acids

Sequence
(BLAST)

001: MANNGPSWDG LLKWSLSHSD GASPSRPLSE EDRQWFMEAM QGHTIDSISR MKQISQIMKM PEQLLESQGV TIDDLEGMLD ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKAA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF ITDPDIRVRT KALGAISSLI RHNQQGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLIHY LLQESNSDCR IVRDLGFPRV MIHLASNQDL EVREFALRGL LELTREESDR NLDRADVNLR QLLEERTRRI IAMSEEDLCA AREERELVDI
301: LWTVCYDEPS LLRERGLVYL PCDDEMAPDV VRDRFEPPLR AWAARRDDEI NEPPVPLLLG PAQ

Best Arabidopsis Sequence Match ( AT3G53800.1 )
(BLAST)

001: MANNGPNWDG LLKWSLSHSD GASSSSRISE EDRQWFVEAM QAHTIDSISR MKVISQIMKM PEQVLEAQGV TPDDLEGMLA ELQEHVESID LANDLHSIGG
101: LVPLLSYLKN SNAKIRAKSA DVLTTVVQNN PRSQQLVMEA NGFEPLLTNF IADPDIRVRT KALGAISSLI RNNQPGITAF RLANGYAGLR DALVSDTVRF
201: QRKALNLLHY LLQESNSDCK IVRDLGFPRI MIHLASNQDF EVREFALRGL LELAREESVR NLDRGDVNLR QLLEERTRRI IVMSDEDLCA AREERQLVDS
301: LWTVCYDEPS LLRERGLVYL PSDDELAPDV VRDRFEPPLR AWAARRHDET SESPVPLLLG PAP

Arabidopsis Description

Fes1BFes1B [Source:UniProtKB/TrEMBL;Acc:Q9M346]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.