Factsheet for Bra006889.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78051	Canola	extracellular	92.37	92.37
CDX73670	Canola	extracellular	90.26	90.26
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	84.21	83.77
VIT_01s0150g00600.t01	Wine grape	cytosol	60.0	60.96
KRG89892	Soybean	cytosol, extracellular, plastid	35.0	56.6
KRG89891	Soybean	endoplasmic reticulum, extracellular	21.58	55.03
GSMUA_Achr11P...	Banana	extracellular	54.47	52.14
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	51.05	51.6
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	50.26	50.93
Solyc04g009320.2.1	Tomato	golgi	49.74	50.27
EER97031	Sorghum	extracellular, golgi	50.26	46.93
Os09t0512700-01	Rice	extracellular, golgi	50.0	46.34
OQU89185	Sorghum	cytosol	27.89	45.69
TraesCS5D01G303400.1	Wheat	golgi	48.95	45.15
TraesCS5A01G296200.1	Wheat	mitochondrion	48.68	44.9
TraesCS5B01G295400.1	Wheat	golgi	48.95	44.71
HORVU5Hr1G065400.2	Barley	cytosol	20.53	44.07
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	48.95	43.87
EER96516	Sorghum	extracellular, golgi	45.79	42.13
HORVU4Hr1G067060.5	Barley	cytosol	15.0	41.61
HORVU5Hr1G078080.1	Barley	plastid	48.68	39.28
Zm00001d005544_P001	Maize	extracellular, golgi	28.42	30.0
Bra001314.1-P	Field mustard	cytosol	23.16	24.58
Bra029761.1-P	Field mustard	cytosol	23.42	24.25
Bra007027.1-P	Field mustard	cytosol	22.89	23.97

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.1.1.2.6	InterPro:ARM-like	InterPro:ARM-type_fold	EnsemblPlantsGene:Bra006889	EnsemblPlants:Bra006889.1
EnsemblPlants:Bra006889.1-P	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	InterPro:IPR011989	UniProt:M4CRP8	InterPro:Nucleotide_exch_fac_Fes1	PFAM:PF08609
PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	SUPFAM:SSF48371	SignalP:SignalP-noTM	UniParc:UPI0002542DAE	SEG:seg

Description

AT3G51980 (E=2e-170) | binding

Coordinates

chrA09:-:26020638..26022235

Molecular Weight (calculated)

41875.7 Da

IEP (calculated)

4.628

GRAVY (calculated)

-0.038

Length

380 amino acids

Sequence
(BLAST)

001: MNFFRCLTLL VVMALVSGTI AEKANSSGGM VWSSARDEAE LVEDSGLVIG EQDQIDGGFS SLDGMLHWAI GHSDPATLKE AAKDAQKMSM DELQKRQVEL
101: KELVEKLNMP SDGKLMQIAV SDLNNASLSL EDRHRALHEL LILVEPIDNA NDLSKSGGLK VVAGELNHSD SEVRKLAAWV IGKASQNNPF VQAQVLELGA
201: LTTLIKMVNS SSTEEAVKAL FAVSALVRNN VAGQDMFYAS RGYIMLQDVM SNGSLDIKLR RKAVFLVGDL AEFQLQNTDQ KADLPIFSDR LFLKSVVDLI
301: VVLDLDLQEK ALTAINTLLQ LKSIEPLILR DFCGLEGALQ RMKLQLKESM EDEDKRDYAA DVETLRGEVE LIFRKKLGQL

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.