CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular

Predictor Summary:

nucleus 2
mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	80.84	77.59
Os09t0512700-01	Rice	extracellular, golgi	74.69	74.15
TraesCS5D01G303400.1	Wheat	golgi	72.73	71.84
TraesCS5B01G295400.1	Wheat	golgi	72.97	71.39
TraesCS5A01G296200.1	Wheat	mitochondrion	71.74	70.87
HORVU5Hr1G065400.2	Barley	cytosol	30.47	70.06
HORVU4Hr1G067060.5	Barley	cytosol	22.6	67.15
HORVU5Hr1G078080.1	Barley	plastid	71.5	61.78
OQU89185	Sorghum	cytosol	35.14	61.64
EER96516	Sorghum	extracellular, golgi	57.25	56.42
GSMUA_Achr11P...	Banana	extracellular	54.79	56.17
KRG89891	Soybean	endoplasmic reticulum, extracellular	19.41	53.02
VIT_01s0150g00600.t01	Wine grape	cytosol	48.16	52.41
Bra006889.1-P	Field mustard	extracellular	46.93	50.26
CDX73670	Canola	extracellular	46.68	50.0
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	45.95	49.73
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	45.7	49.6
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	46.19	49.21
CDX78051	Canola	extracellular	45.95	49.21
Solyc04g009320.2.1	Tomato	golgi	45.45	49.2
KRG89892	Soybean	cytosol, extracellular, plastid	27.76	48.09
KXG37246	Sorghum	cytosol, nucleus, plasma membrane	22.85	25.0
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	20.88	22.14

Protein Annotations

EnsemblPlants:EER97031	EnsemblPlantsGene:SORBI_3002G261700	EntrezGene:8054806	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18
PFAM:PF08609	ProteinID:EER97031	ProteinID:EER97031.1	RefSeq:XP_002460510.1	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI0001A83896	UniProt:C5X5C3	MapMan:19.1.1.2.6	:

Description

hypothetical protein

Coordinates

chr2:+:64694572..64699383

Molecular Weight (calculated)

44302.2 Da

IEP (calculated)

4.476

GRAVY (calculated)

-0.090

Length

407 amino acids

Sequence
(BLAST)

001: MAKGRAHHSK RPTHQLLLAA VLSVSVLLPL FVPAAATVAV AEGDGVSALG GGKPLAVGKD EGKLVAEGDA GGGGSVEEDE FAGGFGSLDS MLQWAIGNSD
101: PEKLKEEAAD AQKLSEDELL KRRQEIKELM EKLKMPSDAD LMKIAIDDLN NSSISLEDRQ RALQELLVLV EPIDNANDLD KLGGLLPVIQ ELSNANEEIR
201: TTSAWVLGTA SQNNELVQNQ ILGYGALARL VKMGYSTSAE EAAKALYAIS SLIRNNVNGQ EAFHSENGSA MLQHILVSNN IDVRLQKKVV FLVTDLADFQ
301: LNSGIVQLPF LSERLFLKSI MDMLSRFDLD LQEKVLLAIK NLLKLSSTDV EDFEFCDLSN VLLRLGVQLE DLTPEDQKEF AVEVDALRRE VQTLFQQKLK
401: QGKATVA

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.