Factsheet for HORVU5Hr1G065400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 1
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G067060.5	Barley	cytosol	71.19	91.97
TraesCS5A01G296200.1	Wheat	mitochondrion	87.57	37.62
TraesCS5D01G303400.1	Wheat	golgi	85.31	36.65
TraesCS5B01G295400.1	Wheat	golgi	85.31	36.3
HORVU5Hr1G078080.1	Barley	plastid	93.22	35.03
Os09t0512700-01	Rice	extracellular, golgi	75.71	32.68
KRG89892	Soybean	cytosol, extracellular, plastid	42.37	31.91
EER97031	Sorghum	extracellular, golgi	70.06	30.47
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	63.84	26.65
GSMUA_Achr11P...	Banana	extracellular	49.72	22.17
VIT_01s0150g00600.t01	Wine grape	cytosol	46.33	21.93
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	44.63	21.01
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	44.07	20.8
CDX73670	Canola	extracellular	44.63	20.79
Solyc04g009320.2.1	Tomato	golgi	44.07	20.74
Bra006889.1-P	Field mustard	extracellular	44.07	20.53
CDX78051	Canola	extracellular	44.07	20.53
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	44.07	20.42
HORVU5Hr1G113810.3	Barley	cytosol	27.12	12.73
HORVU4Hr1G060150.6	Barley	mitochondrion	25.42	11.78
KRG89891	Soybean	endoplasmic reticulum, extracellular	2.26	2.68

Protein Annotations

EnsemblPlants:HORVU5Hr1G065400.2	EnsemblPlantsGene:HORVU5Hr1G065400	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	SUPFAM:SSF48371	UniParc:UPI000B47B4B2
UniProt:A0A287RJZ6	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:-:500698642..500700583

Molecular Weight (calculated)

19485.4 Da

IEP (calculated)

4.730

GRAVY (calculated)

-0.041

Length

177 amino acids

Sequence
(BLAST)

001: MGYSTSAKEA AKAMYAISAL IRNNVNGQEA FALENGNAML QHILGSNSVD VGLQKKAVFL LTDLADFQLN SGNSGLTFLS ERFLLKSVTD MLSEFDLDLQ
101: EKVLLAIRSL LKLPSTDARD FKSCGLDSVL YRLGVQLEEL PSEEQKEYAR EVDALRREVL MFFEQKLKPG TAAAAVS

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [extracellular,plasma membrane,endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.