Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G065400.2 | Barley | cytosol | 91.97 | 71.19 |
| TraesCS5A01G296200.1 | Wheat | mitochondrion | 85.4 | 28.4 |
| TraesCS5D01G303400.1 | Wheat | golgi | 83.94 | 27.91 |
| TraesCS5B01G295400.1 | Wheat | golgi | 83.21 | 27.4 |
| HORVU5Hr1G078080.1 | Barley | plastid | 90.51 | 26.33 |
| Os09t0512700-01 | Rice | extracellular, golgi | 75.91 | 25.37 |
| KRG89892 | Soybean | cytosol, extracellular, plastid | 40.88 | 23.83 |
| EER97031 | Sorghum | extracellular, golgi | 67.15 | 22.6 |
| Zm00001d021120_P001 | Maize | extracellular, golgi, vacuole | 59.12 | 19.1 |
| GSMUA_Achr11P... | Banana | extracellular | 45.26 | 15.62 |
| CDX73670 | Canola | extracellular | 43.07 | 15.53 |
| CDX78051 | Canola | extracellular | 42.34 | 15.26 |
| VIT_01s0150g00600.t01 | Wine grape | cytosol | 41.61 | 15.24 |
| AT3G51980.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 42.34 | 15.18 |
| Bra006889.1-P | Field mustard | extracellular | 41.61 | 15.0 |
| PGSC0003DMT400034360 | Potato | endoplasmic reticulum, extracellular, vacuole | 40.88 | 14.93 |
| Solyc04g009320.2.1 | Tomato | golgi | 40.88 | 14.89 |
| PGSC0003DMT400082480 | Potato | endoplasmic reticulum, extracellular, golgi | 40.15 | 14.63 |
| HORVU5Hr1G113810.3 | Barley | cytosol | 21.9 | 7.96 |
| HORVU4Hr1G060150.6 | Barley | mitochondrion | 20.44 | 7.33 |
| KRG89891 | Soybean | endoplasmic reticulum, extracellular | 0.73 | 0.67 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G067060.5 | EnsemblPlantsGene:HORVU4Hr1G067060 | Gene3D:1.25.10.10 | InterPro:ARM-like | InterPro:IPR011989 | UniParc:UPI000B466ECE |
| UniProt:A0A287PFR3 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:557221507..557227288
Molecular Weight (calculated)
15094.2 Da
IEP (calculated)
4.357
GRAVY (calculated)
0.107
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MHILGSNSVD VGLQKKAVFL LTDLADFQLN SGNSGLTFVS ERFLLKSVTD MLSEFDLDLQ EKVLLAIRSL LKLPSTDARD FESCGLDSVL CRLGVQLEEL
101: PSEEQKEYAG EVDALRREVL MLFEQKLKLG TAAAAVS
101: PSEEQKEYAG EVDALRREVL MLFEQKLKLG TAAAAVS
001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.