Factsheet for GSMUA_Achr11P20040_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0150g00600.t01	Wine grape	cytosol	59.95	63.64
CDX73670	Canola	extracellular	54.41	56.84
KRG89891	Soybean	endoplasmic reticulum, extracellular	21.16	56.38
Os09t0512700-01	Rice	extracellular, golgi	57.18	55.37
CDX78051	Canola	extracellular	52.9	55.26
TraesCS5D01G303400.1	Wheat	golgi	57.18	55.1
TraesCS5A01G296200.1	Wheat	mitochondrion	57.18	55.1
TraesCS5B01G295400.1	Wheat	golgi	57.43	54.81
EER97031	Sorghum	extracellular, golgi	56.17	54.79
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	52.64	54.71
Bra006889.1-P	Field mustard	extracellular	52.14	54.47
KRG89892	Soybean	cytosol, extracellular, plastid	32.24	54.47
OQU89185	Sorghum	cytosol	31.49	53.88
EER96516	Sorghum	extracellular, golgi	54.91	52.78
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	48.87	51.73
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	54.66	51.18
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	48.11	50.8
Solyc04g009320.2.1	Tomato	golgi	47.86	50.53
HORVU5Hr1G065400.2	Barley	cytosol	22.17	49.72
HORVU5Hr1G078080.1	Barley	plastid	58.44	49.26
HORVU4Hr1G067060.5	Barley	cytosol	15.62	45.26
Zm00001d005544_P001	Maize	extracellular, golgi	32.75	36.11
GSMUA_Achr10P...	Banana	cytosol	21.91	22.31
GSMUA_Achr7P15030_001	Banana	extracellular	8.06	21.05
GSMUA_Achr8P20740_001	Banana	cytosol	1.26	8.93

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.1.1.2.6	InterPro:ARM-like	InterPro:ARM-type_fold	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
EnsemblPlantsGene:GSMUA_Achr11G20040_001	EnsemblPlants:GSMUA_Achr11P20040_001	EnsemblPlants:GSMUA_Achr11T20040_001	InterPro:IPR011989	UniProt:M0RTT4	InterPro:Nucleotide_exch_fac_Fes1
PFAM:PF08609	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	SUPFAM:SSF48371	SignalP:SignalP-noTM	UniParc:UPI000294A40F
SEG:seg	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G20040_001]

Coordinates

chr11:+:21036693..21048913

Molecular Weight (calculated)

44482.5 Da

IEP (calculated)

4.494

GRAVY (calculated)

-0.134

Length

397 amino acids

Sequence
(BLAST)

001: MGKGLLLLPF LFSLLAAAAA AAAEARANKS SSLEGLFWAT GKDESELLAM VESKEEPSAR EDEIDGFAGG FSSLDGMLQW AIAGHSDPEK LKEKAMDVQR
101: LSEDELKRRR LEIKELMEKL KTPSDAELMK IAIADLNNSS ITLEDRQRAL NELLFLVEPI DNANDLDKLG GLVVVIRELD NTETDIRTTS AWILGKASQN
201: NALVQNQILT HGALTKLMKM VNSSFTEEAV KALYAISALI RNNEIGQRLF YSEEGYIMLQ DIMGNSSIDI RLRKKAAFLV ADLADYQLQY ADNSELHFLG
301: DRFFLKAVVD LILTPDLDLQ EKALLAVRSL LQLTSTDASD LRDFCSLDRI LESTRKDLEK LMLEEDLRDF VNEIENLRRE VAIIFHSKLE KVAWVPT

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.