CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96516	Sorghum	extracellular, golgi	98.28	55.21
KRG89892	Soybean	cytosol, extracellular, plastid	47.84	47.23
EER97031	Sorghum	extracellular, golgi	61.64	35.14
GSMUA_Achr11P...	Banana	extracellular	53.88	31.49
Zm00001d005544_P001	Maize	extracellular, golgi	47.41	30.56
VIT_01s0150g00600.t01	Wine grape	cytosol	46.98	29.14
Bra006889.1-P	Field mustard	extracellular	45.69	27.89
CDX73670	Canola	extracellular	45.69	27.89
CDX78051	Canola	extracellular	45.26	27.63
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	44.4	26.96
Solyc04g009320.2.1	Tomato	golgi	40.95	25.27
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	40.52	25.07
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	40.52	25.0
KXG37246	Sorghum	cytosol, nucleus, plasma membrane	26.72	16.67
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	26.72	16.15
KRG89891	Soybean	endoplasmic reticulum, extracellular	0.0	0.0

Protein Annotations

EnsemblPlants:OQU89185	EnsemblPlantsGene:SORBI_3002G156900	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	ProteinID:OQU89185	ProteinID:OQU89185.1
SUPFAM:SSF48371	UniParc:UPI0009DC83A7	UniProt:A0A1W0W4C4	MapMan:19.1.1.2.6	:	:

Description

hypothetical protein

Coordinates

chr2:-:47687308..47688579

Molecular Weight (calculated)

25583.7 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.087

Length

232 amino acids

Sequence
(BLAST)

001: LDKLGGLLPL IQELSNADEG MRTTSAWVLG KASQNNVLVQ NQILGYGALQ GLVKMGYSSS APEAAKALYA VSSLIRDNGH GQELFLSENG YAMLQHVLST
101: TRTNVRLQKK VVSLLAYIAD FQLNTGKSQA PSLSNHFFIK SVVEMISSVP DLDLQEKSLL AVRSLLQLTS ADATDLQKFS GLNDSLNTLR LQLDELTSHE
201: EQREYALEVE ILRREVHIVF QQKIDQARVV AT

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.