Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78051 | Canola | extracellular | 96.05 | 96.05 |
| Bra006889.1-P | Field mustard | extracellular | 90.26 | 90.26 |
| AT3G51980.1 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 81.58 | 81.15 |
| VIT_01s0150g00600.t01 | Wine grape | cytosol | 61.05 | 62.03 |
| KRG89892 | Soybean | cytosol, extracellular, plastid | 35.53 | 57.45 |
| GSMUA_Achr11P... | Banana | extracellular | 56.84 | 54.41 |
| PGSC0003DMT400082480 | Potato | endoplasmic reticulum, extracellular, golgi | 52.63 | 53.19 |
| KRG89891 | Soybean | endoplasmic reticulum, extracellular | 20.79 | 53.02 |
| PGSC0003DMT400034360 | Potato | endoplasmic reticulum, extracellular, vacuole | 51.84 | 52.53 |
| Solyc04g009320.2.1 | Tomato | golgi | 51.32 | 51.86 |
| Os09t0512700-01 | Rice | extracellular, golgi | 51.32 | 47.56 |
| EER97031 | Sorghum | extracellular, golgi | 50.0 | 46.68 |
| TraesCS5D01G303400.1 | Wheat | golgi | 50.26 | 46.36 |
| TraesCS5A01G296200.1 | Wheat | mitochondrion | 50.0 | 46.12 |
| TraesCS5B01G295400.1 | Wheat | golgi | 50.26 | 45.91 |
| OQU89185 | Sorghum | cytosol | 27.89 | 45.69 |
| Zm00001d021120_P001 | Maize | extracellular, golgi, vacuole | 50.0 | 44.81 |
| HORVU5Hr1G065400.2 | Barley | cytosol | 20.79 | 44.63 |
| EER96516 | Sorghum | extracellular, golgi | 46.84 | 43.1 |
| HORVU4Hr1G067060.5 | Barley | cytosol | 15.53 | 43.07 |
| HORVU5Hr1G078080.1 | Barley | plastid | 50.26 | 40.55 |
| Zm00001d005544_P001 | Maize | extracellular, golgi | 28.42 | 30.0 |
| CDX73975 | Canola | cytosol | 22.89 | 24.3 |
| CDY44699 | Canola | cytosol | 22.89 | 23.71 |
| CDY41617 | Canola | cytosol | 22.63 | 23.43 |
| CDY65836 | Canola | cytosol | 22.37 | 23.42 |
| CDY07920 | Canola | cytosol | 21.84 | 23.18 |
| CDX73524 | Canola | cytosol | 22.11 | 23.14 |
| CDX85186 | Canola | mitochondrion | 5.79 | 14.1 |
Protein Annotations
| EnsemblPlants:CDX73670 | EnsemblPlantsGene:GSBRNA2T00109250001 | Gene3D:1.25.10.10 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:IPR011989 | InterPro:Nucleotide_exch_fac_Fes1 | PANTHER:PTHR19316 | PANTHER:PTHR19316:SF18 | PFAM:PF08609 |
| ProteinID:CDX73670 | ProteinID:CDX73670.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF48371 | UniParc:UPI0004EE8709 |
| MapMan:19.1.1.2.6 | : | : | : | : | : |
Description
BnaC08g23330D
Coordinates
chrLK031799:+:2013486..2015390
Molecular Weight (calculated)
41824.6 Da
IEP (calculated)
4.584
GRAVY (calculated)
0.005
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MNFFRCLSLL VVIALVNGTI AEKANSSGGM VWATARDEAE LVEDSGLVIG EQDQIDGGFS SLDGMLHWAI GHSDPATLKE AAKDAQKMSM DELQKRQVEL
101: KELVEKLNMP SDAKLMQIAV SDLNNASLSL EDRHRALHEL LILVEPIDNA NDLSKSGGLK VVAGELNHSD SEVRKLAAWV LGKASQNNPF VQAQVLELGA
201: LTTLIKMVNS SSTEEAVKAL FAVSALVRNN VAGQDMFYAS RGYIMLQDVM SNGSLDIKLR RKAVFLVGDL AEFQLQNTDQ KAELPIFSDR LFLKSVVDLI
301: LVLDLDLQEK ALTAINTLLQ LKSIEPLILR DFCGLQGALE RMKLQLEESM ADEDKRDYAA DVESLRGEVE LIFRKKLGLL
101: KELVEKLNMP SDAKLMQIAV SDLNNASLSL EDRHRALHEL LILVEPIDNA NDLSKSGGLK VVAGELNHSD SEVRKLAAWV LGKASQNNPF VQAQVLELGA
201: LTTLIKMVNS SSTEEAVKAL FAVSALVRNN VAGQDMFYAS RGYIMLQDVM SNGSLDIKLR RKAVFLVGDL AEFQLQNTDQ KAELPIFSDR LFLKSVVDLI
301: LVLDLDLQEK ALTAINTLLQ LKSIEPLILR DFCGLQGALE RMKLQLEESM ADEDKRDYAA DVESLRGEVE LIFRKKLGLL
001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL
Arabidopsis Description
ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.