CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX73670	Canola	extracellular	96.05	96.05
Bra006889.1-P	Field mustard	extracellular	92.37	92.37
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	81.05	80.63
VIT_01s0150g00600.t01	Wine grape	cytosol	59.74	60.7
KRG89892	Soybean	cytosol, extracellular, plastid	35.0	56.6
GSMUA_Achr11P...	Banana	extracellular	55.26	52.9
KRG89891	Soybean	endoplasmic reticulum, extracellular	20.53	52.35
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	51.58	52.13
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	50.79	51.47
Solyc04g009320.2.1	Tomato	golgi	50.26	50.8
Os09t0512700-01	Rice	extracellular, golgi	50.0	46.34
EER97031	Sorghum	extracellular, golgi	49.21	45.95
TraesCS5D01G303400.1	Wheat	golgi	49.47	45.63
OQU89185	Sorghum	cytosol	27.63	45.26
TraesCS5B01G295400.1	Wheat	golgi	49.47	45.19
TraesCS5A01G296200.1	Wheat	mitochondrion	48.95	45.15
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	49.21	44.1
HORVU5Hr1G065400.2	Barley	cytosol	20.53	44.07
EER96516	Sorghum	extracellular, golgi	46.05	42.37
HORVU4Hr1G067060.5	Barley	cytosol	15.26	42.34
HORVU5Hr1G078080.1	Barley	plastid	48.95	39.49
Zm00001d005544_P001	Maize	extracellular, golgi	28.16	29.72
CDX73975	Canola	cytosol	22.63	24.02
CDY44699	Canola	cytosol	22.63	23.43
CDY65836	Canola	cytosol	22.37	23.42
CDY41617	Canola	cytosol	22.37	23.16
CDX73524	Canola	cytosol	22.11	23.14
CDY07920	Canola	cytosol	21.58	22.91
CDX85186	Canola	mitochondrion	6.05	14.74

Protein Annotations

EnsemblPlants:CDX78051	EnsemblPlantsGene:GSBRNA2T00129340001	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	PFAM:PF08609
ProteinID:CDX78051	ProteinID:CDX78051.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF48371	UniParc:UPI0004EE42C9
MapMan:19.1.1.2.6	:	:	:	:	:

Description

BnaA09g32460D

Coordinates

chrLK031814:-:847584..849447

Molecular Weight (calculated)

41902.8 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.023

Length

380 amino acids

Sequence
(BLAST)

001: MNFFRCLTLL VVMALVSGTI AEKANSSGGM VWSSARDEAE LVEDSGLVIG EQDQIDGGFS SLDGMLHWAI GHSDPATLKE AAKDAQKMSM DELQKRQVEL
101: KELVEKLNMP SDGKLMKIAV SDLNNASLSL EDRHRALHEL LILVEPIDNA NDLSKSGGLK VVAGELNHSD SEVRKLAAWV IGKASQNNPF VQAQVLELGA
201: LTTLIKMVNS SSTEEAVKAL FAVSALVRNN VAGQDMFYAS RGYIMLQDVM SNGSLDIKLR RKAVFLVGDL AEFQLQNTDR KAELPIFSDR LFLKSVVDLI
301: VVLDLDLQEK ALTAINTLLQ LKSIEPLILR DFCGLEGALQ RMKLQLKESM EDEDKRDYAA DVETLRGEVE LIFRKKLGLL

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.