Factsheet for HORVU5Hr1G078080.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, endoplasmic reticulum, plastid
ChloroP:	plastid
MultiLoc:	endoplasmic reticulum
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G065400.2	Barley	cytosol	35.03	93.22
HORVU4Hr1G067060.5	Barley	cytosol	26.33	90.51
TraesCS5A01G296200.1	Wheat	mitochondrion	77.28	88.35
TraesCS5D01G303400.1	Wheat	golgi	76.43	87.38
TraesCS5B01G295400.1	Wheat	golgi	76.43	86.54
Os09t0512700-01	Rice	extracellular, golgi	65.61	75.37
EER97031	Sorghum	extracellular, golgi	61.78	71.5
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	58.17	64.62
GSMUA_Achr11P...	Banana	extracellular	49.26	58.44
VIT_01s0150g00600.t01	Wine grape	cytosol	42.04	52.94
KRG89891	Soybean	endoplasmic reticulum, extracellular	16.35	51.68
CDX73670	Canola	extracellular	40.55	50.26
CDX78051	Canola	extracellular	39.49	48.95
Bra006889.1-P	Field mustard	extracellular	39.28	48.68
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	39.07	48.17
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	38.0	47.73
KRG89892	Soybean	cytosol, extracellular, plastid	23.78	47.66
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	37.58	47.07
Solyc04g009320.2.1	Tomato	golgi	36.94	46.28
HORVU5Hr1G113810.3	Barley	cytosol	18.68	23.34
HORVU4Hr1G060150.6	Barley	mitochondrion	18.47	22.77

Protein Annotations

EnsemblPlants:HORVU5Hr1G078080.1	EnsemblPlantsGene:HORVU5Hr1G078080	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18	PFAM:PF08609
SEG:seg	SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI000B46861B	UniProt:A0A287RWT0	MapMan:19.1.1.2.6

Description

No Description!

Coordinates

chrchr5H:+:554442296..554446347

Molecular Weight (calculated)

51115.0 Da

IEP (calculated)

5.077

GRAVY (calculated)

-0.216

Length

471 amino acids

Sequence
(BLAST)

001: SGSSANTAFL TNSRETTQSP NHTKRRERLD ISKIPNSKKI KNKRTLFPPH FCCSMAMAKA RPRSARSSHR RCNLLLSVAL LSALLLLPAA TASAAVAVAV
101: AAEGDEENRS RGAATQWATG KDEGELAAER EAAGEGSVVE DDFAGGFGSL DSMLQWAIGN SDPGRLKEEA ADVQKLSEDE LLKRRHEIKD LMEKLKMPSD
201: ADLMKIAIAD LNNASISLED RQRALQELLI LVEPIDNAND LDKIGGLVPV IQDLNNANEE IRTTSAWILG TASQNNALVQ SQILGYGALA RLVKMGYSTS
301: TKEAAKAMYA ISALIRNNVN GQEAFALENG NAMLQHILGS NSVDVGLQKK AVFLLTDLAD FQLNSGNSGL TFLSERVLLK SVTDMLSEFD LDLQEKVLLA
401: IRSLLKLPST DARDFESCGL DSVLYRLGVQ LEELPSEDQK EYAGEVDALR REVLMFFQQK LKPGTAAAAA L

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.