Factsheet for Zm00001d021120_P001

Subcellular Localization

min:

: max

Winner_takes_all: golgi, extracellular, vacuole

Predictor Summary:

mitochondrion 2
extracellular 3
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER97031	Sorghum	extracellular, golgi	77.59	80.84
Os09t0512700-01	Rice	extracellular, golgi	67.45	69.76
TraesCS5D01G303400.1	Wheat	golgi	65.09	66.99
TraesCS5B01G295400.1	Wheat	golgi	65.57	66.83
TraesCS5A01G296200.1	Wheat	mitochondrion	64.86	66.75
HORVU5Hr1G065400.2	Barley	cytosol	26.65	63.84
HORVU4Hr1G067060.5	Barley	cytosol	19.1	59.12
HORVU5Hr1G078080.1	Barley	plastid	64.62	58.17
GSMUA_Achr11P...	Banana	extracellular	51.18	54.66
VIT_01s0150g00600.t01	Wine grape	cytosol	45.75	51.87
KRG89891	Soybean	endoplasmic reticulum, extracellular	18.16	51.68
CDX73670	Canola	extracellular	44.81	50.0
CDX78051	Canola	extracellular	44.1	49.21
Bra006889.1-P	Field mustard	extracellular	43.87	48.95
PGSC0003DMT400082480	Potato	endoplasmic reticulum, extracellular, golgi	43.16	48.67
PGSC0003DMT400034360	Potato	endoplasmic reticulum, extracellular, vacuole	42.92	48.53
Solyc04g009320.2.1	Tomato	golgi	42.92	48.4
AT3G51980.1	Thale cress	endoplasmic reticulum, extracellular, plasma membrane	43.4	48.17
KRG89892	Soybean	cytosol, extracellular, plastid	25.47	45.96
Zm00001d005544_P001	Maize	extracellular, golgi	32.78	38.61
Zm00001d012955_P001	Maize	cytosol	17.69	26.32
Zm00001d034667_P002	Maize	cytosol	20.52	23.39
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	20.28	22.34

Protein Annotations

EnsemblPlants:Zm00001d021120_P001	EnsemblPlants:Zm00001d021120_T001	EnsemblPlantsGene:Zm00001d021120	Gene3D:1.25.10.10	GO:GO:0003674	GO:GO:0005488
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	PANTHER:PTHR19316	PANTHER:PTHR19316:SF18
PFAM:PF08609	ProteinID:ONM56310.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF48371	TMHMM:TMhelix
UniParc:UPI0008444134	UniProt:A0A1D6I8D9	MapMan:19.1.1.2.6	:	:	:

Description

ARM repeat superfamily protein

Coordinates

chr7:+:143199722..143204781

Molecular Weight (calculated)

46411.9 Da

IEP (calculated)

4.586

GRAVY (calculated)

-0.001

Length

424 amino acids

Sequence
(BLAST)

001: MAKGRAHPSK RPTHQLLAAV LSVFVLLPLL VPAAATVAVA VAVAEGGGKQ LAVGKDEGKL VSEGDAGGGG LVEENEFAGG FGSLDSMLQW AIGNSDPEKL
101: KEGAADVQKL SADELLERRQ EIKELMEKLK MPSDADLMKI AIDDLNNSSI SLEDRQRALQ ELLVLVEPID NANDLEKLGG LLPVIQELNN ANEEIRTTSA
201: WVLGTASQNN ELVQNQILGY GALVRLVKMG YSTSTEEAAK ALYAISSLIR NNVNGQEAFH SENGSAMLQH ILVSNNIDVR LQKKAVFLVT DLADFQLNSG
301: IAQLPFLSDR LFLKSIVDML SRFDLDLHEK VVIIFSFINL CLRHSFISEA QIGKVLLAIK SLLKLSSTDV EDFEFYDLDS VLLRLGVQLE DLTPEDQKEF
401: AVEVDALRRE VQTLFQQKLK QAHS

Best Arabidopsis Sequence Match ( AT3G51980.1 )
(BLAST)

001: MPTIFFFRYV FLLVVISLVG FSIAEKVNSS GGMVWSSVRD EAELVEDSGV VIGEQDQIDG GFSSLDGMLH WAIGHSDPAT LKEAAKDAEK MSLDELQKRQ
101: LELKELVEKL KMPSNAKLMQ IAIDDLNNSS LSLEDRHRAL QELLILVEPI DNANDLSKSG GLRVVAGELN HDDTEVRKLA AWVLGKASQN NPFVQEQVLE
201: LGALTTLIKM VNSSSTEEAV KALFAVSALI RNNIAGQDLF FAAHGYIMLR DVMNNGSLDM KLRRKAVFLV GDLAESQLQN TEKDELPIFK DRLFLKSVVD
301: LIVVLDLDLQ EKALTAIQTL LQLKSIEPQV LKESCGLEEA LERMKLQLEE SMADEYKRDY AADVESIRGE VELIFRQKLG LL

Arabidopsis Description

ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SV06]
SUBAcon: [endoplasmic reticulum,extracellular,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.