Factsheet for Zm00001d028588_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

extracellular 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, mitochondrion, plastid
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	extracellular
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d010236_P001
Zm00001d038218_P001
Zm00001d042600_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	Zm00001d010236_P001	AT4G10040.1	21798944
AT5G02150.1	Zm00001d038218_P001	AT4G10040.1	21798944
AT5G02150.1	Zm00001d042600_P001	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	96.36	96.61
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	85.45	85.68
HORVU4Hr1G060150.6	Barley	mitochondrion	82.34	82.98
TraesCS4B01G208900.3	Wheat	mitochondrion	83.38	78.29
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	82.86	77.43
TraesCS4A01G095500.1	Wheat	mitochondrion	76.36	73.68
VIT_08s0007g00740.t01	Wine grape	nucleus	55.06	65.84
CDY41617	Canola	cytosol	58.44	61.31
AT3G53800.1	Thale cress	cytosol	57.66	61.16
CDY44699	Canola	cytosol	58.18	61.04
Bra029761.1-P	Field mustard	cytosol	57.92	60.76
GSMUA_Achr10P...	Banana	cytosol	61.3	60.51
Zm00001d034667_P002	Maize	cytosol	58.18	60.22
CDY65836	Canola	cytosol	56.62	60.06
Bra007027.1-P	Field mustard	cytosol	56.62	60.06
AT3G09350.1	Thale cress	cytosol	56.36	59.78
CDX73975	Canola	cytosol	55.58	59.78
CDX73524	Canola	cytosol	56.1	59.5
Bra001314.1-P	Field mustard	cytosol	55.32	59.5
CDY07920	Canola	cytosol	55.06	59.22
Zm00001d012955_P001	Maize	cytosol	43.12	58.25
Solyc09g011030.2.1	Tomato	cytosol	59.74	57.93
KRH75713	Soybean	cytosol	57.92	57.77
PGSC0003DMT400022748	Potato	nucleus	59.22	57.43
KRH65920	Soybean	cytosol	57.14	57.29
AT5G02150.1	Thale cress	cytosol	47.53	56.48
GSMUA_Achr7P15030_001	Banana	extracellular	19.74	50.0
CDX85186	Canola	mitochondrion	10.91	26.92
Zm00001d021120_P001	Maize	extracellular, golgi, vacuole	22.34	20.28
Zm00001d005544_P001	Maize	extracellular, golgi	15.58	16.67

Protein Annotations

EMBL:BT067088	EnsemblPlants:Zm00001d028588_P001	EnsemblPlants:Zm00001d028588_T001	EnsemblPlantsGene:Zm00001d028588	Gene3D:1.25.10.10	GO:GO:0003674
GO:GO:0005488	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1	InterPro:TOG
PANTHER:PTHR19316	PANTHER:PTHR19316:SF21	PFAM:PF08609	ProteinID:ONL96517.1	SEG:seg	SMART:SM01349
SUPFAM:SSF48371	UniParc:UPI000195CA47	UniProt:C0PFL9	MapMan:19.1.5.4	:	:

Description

Fes1B

Coordinates

chr1:-:40100220..40103763

Molecular Weight (calculated)

42479.7 Da

IEP (calculated)

5.838

GRAVY (calculated)

-0.343

Length

385 amino acids

Sequence
(BLAST)

001: MAGDRLSWAG LLKWSLSYVD GAGPSRAVRE EERRWLADAV EQHMMMDVVS RMREIALLMS TPPAVLEAQG ITHDDIEDLL SELQVHVESI DMANDLHSVG
101: GLVPVIKYLR NSNARIRAKA ADVVTTVVQN NPTSQQLVME ASGFEPLLSN FRSDPDLTAR IKALGALSSL IRNNKPGVSA FRLANGYSGL RDALNSESAR
201: FQRKALSLTH YLLSESHSDC SVFAQLGFPH LMMRLASSDD SGVREAALGG LLELARDTTL GNRNLLAEHD RLRRLLRGRM ESIRTMTPED LDAAREERQL
301: VDSLWITCYH EPSMLRNEGL LVLPGEESFE QPPDVAGRLF EPMRRASARR APPAERSDPR DETGGGMVLL LGGPAQDGRS NSPNH

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.