CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH00982
KRH40245

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	KRH00982	AT4G10040.1	21798944
AT5G02150.1	KRH40245	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65920	Soybean	cytosol	85.49	85.94
VIT_08s0007g00740.t01	Wine grape	nucleus	67.36	80.75
CDY41617	Canola	cytosol	71.76	75.48
CDY44699	Canola	cytosol	71.5	75.2
Bra029761.1-P	Field mustard	cytosol	71.24	74.93
AT3G09350.1	Thale cress	cytosol	69.95	74.38
CDY07920	Canola	cytosol	68.39	73.74
PGSC0003DMT400022748	Potato	nucleus	74.87	72.8
CDX73975	Canola	cytosol	67.1	72.35
Solyc09g011030.2.1	Tomato	cytosol	74.35	72.29
Bra001314.1-P	Field mustard	cytosol	66.84	72.07
GSMUA_Achr10P...	Banana	cytosol	72.02	71.28
AT5G02150.1	Thale cress	cytosol	56.74	67.59
AT3G53800.1	Thale cress	cytosol	62.18	66.12
CDY65836	Canola	cytosol	62.18	66.12
Bra007027.1-P	Field mustard	cytosol	62.18	66.12
CDX73524	Canola	cytosol	61.66	65.56
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	58.81	59.11
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	58.55	58.85
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	57.77	57.92
HORVU4Hr1G060150.6	Barley	mitochondrion	56.74	57.33
GSMUA_Achr7P15030_001	Banana	extracellular	22.28	56.58
TraesCS4B01G208900.3	Wheat	mitochondrion	56.99	53.66
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	57.25	53.64
TraesCS4A01G095500.1	Wheat	mitochondrion	53.37	51.63
CDX85186	Canola	mitochondrion	14.51	35.9
KRG89892	Soybean	cytosol, extracellular, plastid	16.06	26.38
KRG89891	Soybean	endoplasmic reticulum, extracellular	7.25	18.79

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100803376	MapMan:19.1.5.4	EMBL:ACUP02000458	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	ncoils:Coil	EnsemblPlantsGene:GLYMA_01G103200	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
UniProt:I1J702	InterPro:IPR000225	InterPro:IPR011989	EnsemblPlants:KRH75713	ProteinID:KRH75713	ProteinID:KRH75713.1
InterPro:Nucleotide_exch_fac_Fes1	PFAM:PF08609	PANTHER:PTHR19316	PANTHER:PTHR19316:SF27	SMART:SM00185	SMART:SM01349
SUPFAM:SSF48371	InterPro:TOG	UniParc:UPI00023372D9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:34459019..34462915

Molecular Weight (calculated)

42791.5 Da

IEP (calculated)

4.808

GRAVY (calculated)

-0.541

Length

386 amino acids

Sequence
(BLAST)

001: MAKEGPNWDG LLKWSIAHSD GTRPTRNLSE EDRRWFMEAM QSQTIDVVKR MKEITLVMQT PEQVLKDQGV TPADIEDMLD ELQEHVESID MANDLHSIGG
101: LVPLLGYLKS SHANIRAKAA DVVTTIVQNN PRSQQLVMEA NGFEPLISNF SSDPDVTVRT KALGAISSLI RHNKQGITVF RLANGYAALK DALASENVRF
201: QRKALNLTHY LLHENNSDCN IVNELGFPRL LMHLASSEDS DVREAALRGL LELARNTQDG KDGNEEDSEK MKQLLQERIN NISLMSAEDL GVVREERQLV
301: DSLWSTCFNE PSSLREKGLL VLPGEDAPPP DVASKFFEPP LRSSTANPSS KKDSNNEKKE IPLLLGSGPS LADTNNQGSN RENANS

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.