Factsheet for Os03t0271400-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, extracellular, cytosol

Predictor Summary:

nucleus 2
extracellular 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0693050-01
Os05t0420600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	Os04t0693050-01	AT4G10040.1	21798944
AT5G02150.1	Os05t0420600-01	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	86.98	86.98
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	85.68	85.45
HORVU4Hr1G060150.6	Barley	mitochondrion	84.11	84.56
TraesCS4B01G208900.3	Wheat	mitochondrion	85.16	79.76
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	84.9	79.13
TraesCS4A01G095500.1	Wheat	mitochondrion	78.65	75.69
VIT_08s0007g00740.t01	Wine grape	nucleus	55.73	66.46
CDY41617	Canola	cytosol	59.9	62.67
CDY44699	Canola	cytosol	59.38	62.13
GSMUA_Achr10P...	Banana	cytosol	63.02	62.05
Bra029761.1-P	Field mustard	cytosol	59.11	61.85
AT3G09350.1	Thale cress	cytosol	58.33	61.71
CDX73975	Canola	cytosol	56.51	60.61
AT3G53800.1	Thale cress	cytosol	57.29	60.61
CDY07920	Canola	cytosol	55.99	60.06
Bra001314.1-P	Field mustard	cytosol	55.99	60.06
KRH65920	Soybean	cytosol	58.85	58.85
KRH75713	Soybean	cytosol	59.11	58.81
CDY65836	Canola	cytosol	55.47	58.68
Bra007027.1-P	Field mustard	cytosol	55.47	58.68
AT5G02150.1	Thale cress	cytosol	49.48	58.64
CDX73524	Canola	cytosol	54.95	58.13
Solyc09g011030.2.1	Tomato	cytosol	59.9	57.93
PGSC0003DMT400022748	Potato	nucleus	59.64	57.68
Os03t0822700-01	Rice	nucleus	56.77	57.52
GSMUA_Achr7P15030_001	Banana	extracellular	20.31	51.32
CDX85186	Canola	mitochondrion	11.2	27.56
Os09t0512700-01	Rice	extracellular, golgi	22.66	21.22

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.1.5.4	EntrezGene:4332391	ProteinID:ABF95213.1	InterPro:ARM-like	InterPro:ARM-type_fold
ProteinID:BAF11605.1	ProteinID:BAS83480.1	GO:GO:0003674	GO:GO:0005488	InterPro:IPR011989	InterPro:Nucleotide_exch_fac_Fes1
EnsemblPlantsGene:Os03g0271400	EnsemblPlants:Os03t0271400-01	PFAM:PF08609	PANTHER:PTHR19316	PANTHER:PTHR19316:SF21	UniProt:Q10NF0
SMART:SM01349	SUPFAM:SSF48371	InterPro:TOG	UniParc:UPI0000DB41A7	RefSeq:XP_015630563.1	SEG:seg

Description

Armadillo-like helical domain containing protein. (Os03t0271400-01)

Coordinates

chr3:-:9076047..9079383

Molecular Weight (calculated)

42065.3 Da

IEP (calculated)

6.066

GRAVY (calculated)

-0.222

Length

384 amino acids

Sequence
(BLAST)

001: MAGDRLSWSG LLKWSLSYAD GTRPSRAISE EERRWLAEAV ERHMMVDVVS RMREIALLMS TPLSVLEAHG ITPDDIEGLL AELQVHVESI DMANDLHSVG
101: GLVPVIKYLR NSNARIRARA ADVVTTVVQN NPTSQQLVME ASGFDPLLSN FTSDPDLTAR IKALGALSSL IRNNKPGVSA FRLANGYAGL RDALTSESAR
201: FQRKALNLTN YLLSESHSGC SVFAQLGFPR LMMHLVSSDD LGVREAALGG LLELARDTTL GSRSLLADHD RLRRLLQARI ERIRMMAPED LDAAREERQL
301: VDSLWITCYH EPSTLHVEGL LVLPGEECFE QPPDVAGRFF EPLRRSSARR APSNERSDPG DGTGGGMMLL LGPSPGSRSN SGSN

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.