Factsheet for GSMUA_Achr10P22570_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr11P...
GSMUA_Achr5P01400_001
GSMUA_Achr6P18470_001
GSMUA_Achr7P23550_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G02150.1	GSMUA_Achr11P...	AT4G10040.1	21798944
AT5G02150.1	GSMUA_Achr5P01400_001	AT4G10040.1	21798944
AT5G02150.1	GSMUA_Achr6P18470_001	AT4G10040.1	21798944
AT5G02150.1	GSMUA_Achr7P23550_001	AT4G10040.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_08s0007g00740.t01	Wine grape	nucleus	65.38	79.19
KRH75713	Soybean	cytosol	71.28	72.02
AT3G09350.1	Thale cress	cytosol	66.92	71.9
Bra029761.1-P	Field mustard	cytosol	67.44	71.66
CDY44699	Canola	cytosol	67.44	71.66
CDY41617	Canola	cytosol	66.92	71.12
Solyc09g011030.2.1	Tomato	cytosol	72.05	70.78
CDY07920	Canola	cytosol	64.62	70.39
KRH65920	Soybean	cytosol	69.23	70.31
PGSC0003DMT400022748	Potato	nucleus	71.54	70.28
Bra001314.1-P	Field mustard	cytosol	63.59	69.27
CDX73975	Canola	cytosol	63.59	69.27
AT5G02150.1	Thale cress	cytosol	55.38	66.67
AT3G53800.1	Thale cress	cytosol	61.03	65.56
CDY65836	Canola	cytosol	60.26	64.74
Bra007027.1-P	Field mustard	cytosol	60.26	64.74
GSMUA_Achr8P20740_001	Banana	cytosol	9.23	64.29
CDX73524	Canola	cytosol	59.74	64.19
Os03t0271400-01	Rice	cytosol, extracellular, mitochondrion, plastid	62.05	63.02
EER92486	Sorghum	cytosol, extracellular, mitochondrion, plastid	61.03	61.98
Zm00001d028588_P001	Maize	cytosol, extracellular, mitochondrion, plastid	60.51	61.3
HORVU4Hr1G060150.6	Barley	mitochondrion	59.74	60.99
GSMUA_Achr7P15030_001	Banana	extracellular	23.59	60.53
TraesCS4B01G208900.3	Wheat	mitochondrion	60.0	57.07
TraesCS4D01G209700.2	Wheat	cytosol, golgi, plastid	59.74	56.55
TraesCS4A01G095500.1	Wheat	mitochondrion	56.92	55.64
CDX85186	Canola	mitochondrion	13.33	33.33
GSMUA_Achr11P...	Banana	extracellular	22.31	21.91

Protein Annotations

Gene3D:1.25.10.10	MapMan:19.1.5.4	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr10G22570_001	EnsemblPlants:GSMUA_Achr10P22570_001	EnsemblPlants:GSMUA_Achr10T22570_001	InterPro:IPR000225
InterPro:IPR011989	UniProt:M0RKI2	InterPro:Nucleotide_exch_fac_Fes1	PFAM:PF08609	PANTHER:PTHR19316	PANTHER:PTHR19316:SF27
SMART:SM00185	SMART:SM01349	SUPFAM:SSF48371	InterPro:TOG	UniParc:UPI000294D684	SEG:seg

Description

Putative Hsp70-binding protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr10G22570_001]

Coordinates

chr10:-:27723568..27728245

Molecular Weight (calculated)

42604.8 Da

IEP (calculated)

4.736

GRAVY (calculated)

-0.380

Length

390 amino acids

Sequence
(BLAST)

001: MAGDGLKWDG LLKWSLAHAD GTRPPRNLSE EDRKWFMEAM QAQTVDVVKR MKEITSVMKT PEDVLEAQGV KPEDIVEMLD ELQEHVESID MANDLHSIGG
101: LVPLLGYLKN SDSGIRAKAA DVVTTIVQNN PRSQQLVMEA SGLEPLMSNF TLDPDLAVRT KALGAISSLI RNNKAGIAAF RLANGYAGLR DALSSDNVRF
201: QRKALNLIQY LLKENNLDCN IVTELGLPRL MVHLVSSDDS NVREAALGGL LELARDRTSG SSTVLAEEDK LKQILENRIE NISSMSAEDL GAAREERQLV
301: DSLWSTCYNE PSSLREKGLM VLPGEEAPQP PPDVAGKFFE PPLRAWAASK QLQKGGSNSA EDKKQAKPLL LGLGPVGSSL SSNQEQQNPN

Best Arabidopsis Sequence Match ( AT3G09350.1 )
(BLAST)

001: MAKDGPNWDG LLKWSLSHAD GTRPTRQLSE EDRKWFMEAM QSQTVDVVKR MKEITLVMQT PEQVLVEHGV TPEDIQDLLD ELQEHVESID MANDLHSIGG
101: LVPLLSFLKN SHANIRAKAA DVVSTIVQNN PRSQELVMET NALESLLSNF TSDTDIHART QALGAISSLI RHNKPGVTAF KLANGYAGLR DALASDSVRF
201: QRKALNLLQY LLQEDDSDRS IATGLGFPRV MMHLASSDDA EIREAALRGL LELSREKNDG SSSIDKSDEK LRQLLEERIK GITLMSQEDL ETVKEERQLV
301: DLLWSICYNE PSSLREKGLV VLPGEDALPP DVASKLFEPP LRASAANRNA TEKKDEPMKL LGP

Arabidopsis Description

Fes1AFes1A [Source:UniProtKB/TrEMBL;Acc:Q84J81]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.