Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P18470_001 | Banana | cytosol | 94.64 | 94.64 |
| GSMUA_Achr5P01400_001 | Banana | cytosol | 93.75 | 93.75 |
| GSMUA_Achr11P... | Banana | cytosol | 93.75 | 92.92 |
| Bra024541.1-P | Field mustard | cytosol | 90.18 | 90.18 |
| CDY04780 | Canola | cytosol | 90.18 | 90.18 |
| CDY21393 | Canola | cytosol | 90.18 | 90.18 |
| KRH40245 | Soybean | cytosol | 89.29 | 89.29 |
| Bra000699.1-P | Field mustard | cytosol | 89.29 | 89.29 |
| Bra012346.1-P | Field mustard | cytosol | 89.29 | 89.29 |
| CDX90744 | Canola | cytosol | 89.29 | 89.29 |
| KRH00982 | Soybean | cytosol | 89.29 | 89.29 |
| CDY12506 | Canola | cytosol | 89.29 | 89.29 |
| CDY25756 | Canola | cytosol | 89.29 | 89.29 |
| CDY05083 | Canola | cytosol | 88.39 | 88.39 |
| Bra037901.1-P | Field mustard | cytosol | 78.57 | 88.0 |
| AT4G10040.1 | Thale cress | cytosol | 87.5 | 87.5 |
| AT1G22840.1 | Thale cress | cytosol | 88.39 | 86.84 |
| KRH77736 | Soybean | plastid | 86.61 | 85.84 |
| KRH27791 | Soybean | cytosol | 85.71 | 84.96 |
| CDX99521 | Canola | cytosol | 78.57 | 83.02 |
| GSMUA_Achr10P... | Banana | cytosol | 29.46 | 73.33 |
| GSMUA_Achr5P16900_001 | Banana | cytosol | 44.64 | 45.87 |
Protein Annotations
| Gene3D:1.10.760.10 | MapMan:2.4.4.1 | InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006091 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0020037 | GO:GO:0022900 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0070469 |
| EnsemblPlantsGene:GSMUA_Achr7G23550_001 | EnsemblPlants:GSMUA_Achr7P23550_001 | EnsemblPlants:GSMUA_Achr7T23550_001 | InterPro:IPR009056 | InterPro:IPR036909 | UniProt:M0TK41 |
| PFAM:PF00034 | PRINTS:PR00604 | PFscan:PS51007 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 | SUPFAM:SSF46626 |
| UniParc:UPI00029513E9 | SEG:seg | : | : | : | : |
Description
Cytochrome c [Source:GMGC_GENE;Acc:GSMUA_Achr7G23550_001]
Coordinates
chr7:-:25698027..25700214
Molecular Weight (calculated)
12125.4 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.604
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFAEAPPG DPKAGEKIFK TKCAQCHTVD QGAGHKQGPN LNGLFGRQSG TASGYSYSAA NKNKAVVWEE STLYDYLLNP KKYIPGTKMV FPGLKKPQER
101: ADLIAYLKQS TA
101: ADLIAYLKQS TA
001: MASFDEAPPG NAKAGEKIFR TKCAQCHTVE AGAGHKQGPN LNGLFGRQSG TTAGYSYSAA NKNKAVEWEE KALYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKES TAPK
101: ADLIAYLKES TAPK
Arabidopsis Description
CYTC-1CYTC-1 [Source:UniProtKB/TrEMBL;Acc:A0A178W284]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.