Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024541.1-P | Field mustard | cytosol | 94.74 | 96.43 |
| CDY04780 | Canola | cytosol | 94.74 | 96.43 |
| CDY21393 | Canola | cytosol | 94.74 | 96.43 |
| Bra012346.1-P | Field mustard | cytosol | 93.86 | 95.54 |
| CDY12506 | Canola | cytosol | 93.86 | 95.54 |
| CDY25756 | Canola | cytosol | 93.86 | 95.54 |
| AT4G10040.1 | Thale cress | cytosol | 91.23 | 92.86 |
| EES18250 | Sorghum | cytosol | 89.47 | 91.07 |
| KRH40245 | Soybean | cytosol | 88.6 | 90.18 |
| Zm00001d010236_P001 | Maize | plastid | 88.6 | 90.18 |
| VIT_18s0001g05810.t01 | Wine grape | cytosol | 88.6 | 90.18 |
| Zm00001d038218_P001 | Maize | mitochondrion | 87.72 | 89.29 |
| KRH00982 | Soybean | cytosol | 87.72 | 89.29 |
| PGSC0003DMT400063997 | Potato | cytosol | 87.72 | 89.29 |
| PGSC0003DMT400002609 | Potato | cytosol | 87.72 | 89.29 |
| TraesCS1D01G263400.1 | Wheat | cytosol | 87.72 | 88.5 |
| TraesCS1A01G263300.1 | Wheat | extracellular, unclear | 87.72 | 88.5 |
| GSMUA_Achr7P23550_001 | Banana | cytosol | 86.84 | 88.39 |
| Solyc11g042420.1.1 | Tomato | cytosol | 86.84 | 88.39 |
| Solyc01g103220.2.1 | Tomato | extracellular, plastid, unclear | 86.84 | 88.39 |
| GSMUA_Achr5P01400_001 | Banana | cytosol | 85.96 | 87.5 |
| TraesCS3B01G438700.1 | Wheat | cytosol | 85.96 | 87.5 |
| TraesCS3D01G400400.1 | Wheat | cytosol | 85.96 | 87.5 |
| GSMUA_Achr6P18470_001 | Banana | cytosol | 85.96 | 87.5 |
| Os05t0420600-01 | Rice | mitochondrion | 85.09 | 86.61 |
| TraesCS3A01G405000.1 | Wheat | cytosol | 84.21 | 85.71 |
| EES03996 | Sorghum | cytosol | 84.21 | 85.71 |
| Zm00001d042600_P001 | Maize | cytosol | 84.21 | 85.71 |
| GSMUA_Achr11P... | Banana | cytosol | 84.21 | 84.96 |
| TraesCS1B01G273900.1 | Wheat | cytosol | 73.68 | 74.34 |
| Os04t0693050-01 | Rice | plastid | 58.77 | 70.53 |
| HORVU3Hr1G090840.1 | Barley | mitochondrion, plastid | 84.21 | 64.86 |
| HORVU1Hr1G063940.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 87.72 | 59.52 |
Protein Annotations
| Gene3D:1.10.760.10 | MapMan:2.4.4.1 | EntrezGene:838889 | UniProt:A0A178W284 | ProteinID:AAB72175.1 | ProteinID:AEE30294.1 |
| ArrayExpress:AT1G22840 | EnsemblPlantsGene:AT1G22840 | RefSeq:AT1G22840 | TAIR:AT1G22840 | RefSeq:AT1G22840-TAIR-G | EnsemblPlants:AT1G22840.1 |
| TAIR:AT1G22840.1 | EMBL:AY062853 | EMBL:AY087108 | EMBL:AY114580 | Unigene:At.48220 | Symbol:CYTC-1 |
| InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005758 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0005829 | GO:GO:0006091 |
| GO:GO:0006122 | GO:GO:0006123 | GO:GO:0006139 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008283 |
| GO:GO:0009055 | GO:GO:0009987 | GO:GO:0010336 | GO:GO:0016020 | GO:GO:0020037 | GO:GO:0022900 |
| GO:GO:0046872 | GO:GO:0055114 | GO:GO:0070469 | InterPro:IPR009056 | InterPro:IPR036909 | RefSeq:NP_173697.1 |
| UniProt:O23138 | ProteinID:OAP11811.1 | PFAM:PF00034 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000016 |
| PO:PO:0000017 | PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0006085 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020148 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00604 | PFscan:PS51007 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 |
| SUPFAM:SSF46626 | UniParc:UPI0000128B42 | : | : | : | : |
Description
CYTC-1CYTC-1 [Source:UniProtKB/TrEMBL;Acc:A0A178W284]
Coordinates
chr1:+:8079287..8080574
Molecular Weight (calculated)
12394.7 Da
IEP (calculated)
9.779
GRAVY (calculated)
-0.689
Length
114 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFDEAPPG NAKAGEKIFR TKCAQCHTVE AGAGHKQGPN LNGLFGRQSG TTAGYSYSAA NKNKAVEWEE KALYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKES TAPK
101: ADLIAYLKES TAPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.