Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000699.1-P | Field mustard | cytosol | 97.32 | 97.32 |
| CDX90744 | Canola | cytosol | 97.32 | 97.32 |
| Bra037901.1-P | Field mustard | cytosol | 86.61 | 97.0 |
| CDY05083 | Canola | cytosol | 96.43 | 96.43 |
| VIT_18s0001g05810.t01 | Wine grape | cytosol | 93.75 | 93.75 |
| KRH40245 | Soybean | cytosol | 91.96 | 91.96 |
| CDX99521 | Canola | cytosol | 86.61 | 91.51 |
| AT1G22840.1 | Thale cress | cytosol | 92.86 | 91.23 |
| Zm00001d010236_P001 | Maize | plastid | 91.07 | 91.07 |
| Solyc01g103220.2.1 | Tomato | extracellular, plastid, unclear | 91.07 | 91.07 |
| PGSC0003DMT400063997 | Potato | cytosol | 91.07 | 91.07 |
| TraesCS3B01G438700.1 | Wheat | cytosol | 91.07 | 91.07 |
| KRH00982 | Soybean | cytosol | 91.07 | 91.07 |
| TraesCS3D01G400400.1 | Wheat | cytosol | 91.07 | 91.07 |
| EES18250 | Sorghum | cytosol | 91.07 | 91.07 |
| EES03996 | Sorghum | cytosol | 91.07 | 91.07 |
| GSMUA_Achr6P18470_001 | Banana | cytosol | 90.18 | 90.18 |
| Os05t0420600-01 | Rice | mitochondrion | 90.18 | 90.18 |
| PGSC0003DMT400002609 | Potato | cytosol | 90.18 | 90.18 |
| TraesCS3A01G405000.1 | Wheat | cytosol | 90.18 | 90.18 |
| Zm00001d042600_P001 | Maize | cytosol | 89.29 | 89.29 |
| Zm00001d038218_P001 | Maize | mitochondrion | 89.29 | 89.29 |
| Solyc11g042420.1.1 | Tomato | cytosol | 89.29 | 89.29 |
| GSMUA_Achr5P01400_001 | Banana | cytosol | 88.39 | 88.39 |
| GSMUA_Achr11P... | Banana | cytosol | 88.39 | 87.61 |
| GSMUA_Achr7P23550_001 | Banana | cytosol | 87.5 | 87.5 |
| TraesCS1A01G263300.1 | Wheat | extracellular, unclear | 86.61 | 85.84 |
| TraesCS1D01G263400.1 | Wheat | cytosol | 86.61 | 85.84 |
| TraesCS1B01G273900.1 | Wheat | cytosol | 73.21 | 72.57 |
| Os04t0693050-01 | Rice | plastid | 60.71 | 71.58 |
| HORVU3Hr1G090840.1 | Barley | mitochondrion, plastid | 90.18 | 68.24 |
| HORVU1Hr1G063940.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 86.61 | 57.74 |
Protein Annotations
| Gene3D:1.10.760.10 | MapMan:2.4.4.1 | EntrezGene:826595 | UniProt:A0A178UZN3 | ProteinID:AEE82832.1 | ArrayExpress:AT4G10040 |
| EnsemblPlantsGene:AT4G10040 | RefSeq:AT4G10040 | TAIR:AT4G10040 | RefSeq:AT4G10040-TAIR-G | EnsemblPlants:AT4G10040.1 | TAIR:AT4G10040.1 |
| EMBL:AY045944 | EMBL:AY079373 | EMBL:AY087056 | ProteinID:CAB39628.1 | ProteinID:CAB78127.1 | Symbol:CYTC-2 |
| InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005507 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005758 | GO:GO:0006091 | GO:GO:0006122 | GO:GO:0006123 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0010336 | GO:GO:0016020 | GO:GO:0020037 |
| GO:GO:0022900 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0070469 | InterPro:IPR009056 | InterPro:IPR036909 |
| RefSeq:NP_192742.1 | ProteinID:OAO98151.1 | PFAM:PF00034 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009015 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009066 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00604 | PFscan:PS51007 |
| PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 | UniProt:Q9T0G2 | SUPFAM:SSF46626 | UniParc:UPI0000128B4A | : |
Description
CYTC-2CYTC-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UZN3]
Coordinates
chr4:+:6276948..6278622
Molecular Weight (calculated)
12239.6 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.707
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFDEAPPG NPKAGEKIFR TKCAQCHTVE KGAGHKQGPN LNGLFGRQSG TTPGYSYSAA NKSMAVNWEE KTLYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKEG TA
101: ADLIAYLKEG TA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.