Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
20443193
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27791 | Soybean | cytosol | 99.11 | 99.11 |
| KRH40245 | Soybean | cytosol | 91.15 | 91.96 |
| KRH00982 | Soybean | cytosol | 90.27 | 91.07 |
| GSMUA_Achr6P18470_001 | Banana | cytosol | 89.38 | 90.18 |
| GSMUA_Achr11P... | Banana | cytosol | 87.61 | 87.61 |
| GSMUA_Achr5P01400_001 | Banana | cytosol | 86.73 | 87.5 |
| GSMUA_Achr7P23550_001 | Banana | cytosol | 85.84 | 86.61 |
| KRH16722 | Soybean | mitochondrion | 23.01 | 28.89 |
Protein Annotations
| Gene3D:1.10.760.10 | EntrezGene:100305937 | MapMan:2.4.4.1 | EMBL:ACUP02000683 | EMBL:BT089781 | UniProt:C6SX87 |
| InterPro:Cyt_c-like_dom | InterPro:Cyt_c-like_dom_sf | InterPro:Cyt_c_1A/1B | EnsemblPlantsGene:GLYMA_01G230900 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005758 | GO:GO:0006091 | GO:GO:0006122 | GO:GO:0006123 | GO:GO:0006139 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009055 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0020037 | GO:GO:0046872 |
| GO:GO:0055114 | GO:GO:0070469 | InterPro:IPR009056 | InterPro:IPR036909 | EnsemblPlants:KRH77736 | ProteinID:KRH77736 |
| ProteinID:KRH77736.1 | PFAM:PF00034 | PRINTS:PR00604 | PFscan:PS51007 | PANTHER:PTHR11961 | PANTHER:PTHR11961:SF9 |
| SUPFAM:SSF46626 | UniParc:UPI0001B1521B | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:55809555..55813112
Molecular Weight (calculated)
12445.8 Da
IEP (calculated)
9.794
GRAVY (calculated)
-0.729
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MASFDQAPPG DVKSGDKIFR TKCAQCHTVE KGAGHKQGPN LNGLFGRQSG TTPGYSYSSA NKNMAVTWEE KTLYDYLLNP KKYIPGTKMV FPGLKKPQER
101: ADLIAYLKES TAQ
101: ADLIAYLKES TAQ
001: MASFDEAPPG NPKAGEKIFR TKCAQCHTVE KGAGHKQGPN LNGLFGRQSG TTPGYSYSAA NKSMAVNWEE KTLYDYLLNP KKYIPGTKMV FPGLKKPQDR
101: ADLIAYLKEG TA
101: ADLIAYLKEG TA
Arabidopsis Description
CYTC-2CYTC-2 [Source:UniProtKB/TrEMBL;Acc:A0A178UZN3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.